RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 GABRG3Q99928 467 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 SPHK2Q9NRA0 654 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 INTS13Q9NVM9 706 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 SMPD4Q9NXE4 827 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 KIF3AQ9Y496 699 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 TP53BP1Q12888 1972 aaPredicted RBP14.31□□□□□ -0.12
COL1A1-209ENST00000495677 A0A087WV48 116 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 EIF4E1BA6NMX2 242 aaKnown RBP14.3□□□□□ -0.12
COL1A1-209ENST00000495677 KIAA0391O15091 583 aaKnown RBP14.3□□□□□ -0.12
COL1A1-209ENST00000495677 TMEM191BP0C7N4 346 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 TUBP50607 506 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 PSMC1P62191 440 aaKnown RBP14.3□□□□□ -0.12
COL1A1-209ENST00000495677 CYP27A1Q02318 531 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 KCNA1Q09470 495 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 SURF1Q15526 300 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 SFR1Q86XK3 245 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 MIB1Q86YT6 1006 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 NUP93Q8N1F7 819 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 NAT16Q8N8M0 369 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 BAHD1Q8TBE0 780 aaPredicted RBP14.3□□□□□ -0.12
COL1A1-209ENST00000495677 HPDLQ96IR7 371 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 ANKRD36BP1Q96IX9 119 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 PDE11AQ9HCR9 933 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 IL37Q9NZH6 218 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 RAXQ9Y2V3 346 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 R3HCC1Q9Y3T6 440 aaKnown RBP14.3□□□□□ -0.12
COL1A1-209ENST00000495677 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
COL1A1-209ENST00000495677 MYLKQ15746 1914 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 A0A1B0GTW7 788 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 TK2O00142 265 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 COCHO43405 550 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 NDUFS2O75306 463 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 TACC1O75410 805 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 RTN3O95197 1032 aaPredicted RBP14.29□□□□□ -0.12
COL1A1-209ENST00000495677 ABL1P00519 1130 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 PDGFRBP09619 1106 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 YWHAQP27348 245 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 ZNF132P52740 706 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 GRIK2Q13002 908 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 ALCAMQ13740 583 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 C10orf76Q5T2E6 689 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 MCTP1Q6DN14 999 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 TMEM25Q86YD3 366 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 CADM4Q8NFZ8 388 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 SAAL1Q96ER3 474 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 LRIG1Q96JA1 1093 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 MRGPRX1Q96LB2 322 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 MTMR12Q9C0I1 747 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 ELOVL4Q9GZR5 314 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 MRPL44Q9H9J2 332 aaKnown RBP14.29□□□□□ -0.12
COL1A1-209ENST00000495677 OLFML3Q9NRN5 406 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 TOR4AQ9NXH8 423 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 CYP8B1Q9UNU6 501 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 SH3BP1Q9Y3L3 701 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 PCDHGB2Q9Y5G2 931 aa14.29□□□□□ -0.12
COL1A1-209ENST00000495677 FLNBO75369 2602 aaKnown RBP14.29□□□□□ -0.12
COL1A1-209ENST00000495677 ASH1LQ9NR48 2969 aaKnown RBP14.28□□□□□ -0.12
COL1A1-209ENST00000495677 FAM92AA1XBS5 289 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 E9PAM4 449 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 SCAMP3O14828 347 aaKnown RBP14.28□□□□□ -0.12
COL1A1-209ENST00000495677 CACNG3O60359 315 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 BMP15O95972 392 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 ZDHHC11BP0C7U3 371 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 GAP43P17677 238 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 GNL1P36915 607 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-209ENST00000495677 CAMK2BQ13554 666 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 DUOXA2Q1HG44 320 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 HECTD3Q5T447 861 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 EGFLAMQ63HQ2 1017 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 IL27RAQ6UWB1 636 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 HTR3DQ70Z44 454 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 BBS7Q8IWZ6 715 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 CHPFQ8IZ52 775 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 GPD1LQ8N335 351 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 GALNT15Q8N3T1 639 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 DNAJC19Q96DA6 116 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 ACOX2Q99424 681 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 CDC6Q99741 560 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 TMEM30AQ9NV96 361 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 COMMD8Q9NX08 183 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 WSB2Q9NYS7 404 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-209ENST00000495677 NME7Q9Y5B8 376 aa14.28□□□□□ -0.12
COL1A1-209ENST00000495677 NUMA1Q14980 2115 aa14.27□□□□□ -0.12
COL1A1-209ENST00000495677 PTPN1P18031 435 aaKnown RBP14.27□□□□□ -0.13
COL1A1-209ENST00000495677 MAOBP27338 520 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 CD6P30203 668 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 WASP42768 502 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 C19orf57Q0VDD7 668 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 ANO4Q32M45 955 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 GRAMD4Q6IC98 578 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 HS2ST1Q7LGA3 356 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 DYMQ7RTS9 669 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 OR5B17Q8NGF7 314 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 ADAM32Q8TC27 787 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 XPO6Q96QU8 1125 aaKnown RBP14.27□□□□□ -0.13
COL1A1-209ENST00000495677 CBWD1Q9BRT8 395 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 ITM2CQ9NQX7 267 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 TM7SF3Q9NS93 570 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 MARK1Q9P0L2 795 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 USP36Q9P275 1121 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms