RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 FOXF2Q12947 444 aa6.28□□□□□ -1.4
NCKAP1-208ENST00000495619 CCDC33Q8N5R6 958 aa6.28□□□□□ -1.4
NCKAP1-208ENST00000495619 ATP11CQ8NB49 1132 aa6.28□□□□□ -1.4
NCKAP1-208ENST00000495619 ZDHHC12Q96GR4 267 aa6.28□□□□□ -1.4
NCKAP1-208ENST00000495619 ZC3H10Q96K80 434 aaKnown RBP6.28□□□□□ -1.4
NCKAP1-208ENST00000495619 MACROD1Q9BQ69 325 aa6.28□□□□□ -1.4
NCKAP1-208ENST00000495619 MAFFQ9ULX9 164 aa6.28□□□□□ -1.4
NCKAP1-208ENST00000495619 FAM50BQ9Y247 325 aa6.28□□□□□ -1.4
NCKAP1-208ENST00000495619 A8MVJ9 347 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 AREL1O15033 823 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 A1BGP04217 495 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 TUBB4AP04350 444 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 CELA2AP08217 269 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 NBPF7P0C2Y1 421 aaPredicted RBP6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 RBL1P28749 1068 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 RENBPP51606 427 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 CLCA4Q14CN2 919 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 FAM187BQ17R55 369 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 ZNF782Q6ZMW2 699 aaPredicted RBP6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 CHSY1Q86X52 802 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 C16orf71Q8IYS4 520 aaPredicted RBP6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 HS6ST2Q96MM7 605 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 MMS19Q96T76 1030 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 TMOD4Q9NZQ9 345 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 HPSEQ9Y251 543 aa6.27□□□□□ -1.41
NCKAP1-208ENST00000495619 POM121BA6NF01 834 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 WIPF3A6NGB9 483 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 TMEM232C9JQI7 657 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 PPP6CO00743 305 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 CCNT2O60583 730 aaKnown RBP6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 RNF8O76064 485 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 MT-CO3P00414 261 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 KRT18P05783 430 aaKnown RBP6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 TRIM27P14373 513 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 FPR3P25089 353 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 PIK3CBP42338 1070 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 ALDH5A1P51649 535 aaPredicted RBP6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 COPB1P53618 953 aaKnown RBP6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 ZNF543Q08ER8 600 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 MIS18BP1Q6P0N0 1132 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 TMEM65Q6PI78 240 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 USP17L6PQ6QN14 398 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 VSTM1Q6UX27 236 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 CLEC9AQ6UXN8 241 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 CATSPERGQ6ZRH7 1159 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 KRT28Q7Z3Y7 464 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 FSTL5Q8N475 847 aaPredicted RBP6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 VGLL2Q8N8G2 317 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 DDB2Q92466 427 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 FAM227BQ96M60 508 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 EIF2AQ9BY44 585 aaKnown RBP6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 MAGEB5Q9BZ81 275 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 SLC29A3Q9BZD2 475 aa6.26□□□□□ -1.41
NCKAP1-208ENST00000495619 TISP43B9A030 160 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 F8W8V4 182 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 COQ9O75208 318 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 KELP23276 732 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 EIF4A1P60842 406 aaKnown RBP6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 LMAN2Q12907 356 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 KCNAB1Q14722 419 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 RNASE12Q5GAN4 147 aaKnown RBP6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 CCDC181Q5TID7 509 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 MANEALQ5VSG8 457 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 KSR2Q6VAB6 950 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 BCDIN3DQ7Z5W3 292 aaKnown RBP6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 C11orf44Q8N8P7 122 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 COLEC11Q9BWP8 271 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 SLC25A32Q9H2D1 315 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 ZBTB26Q9HCK0 441 aa6.25□□□□□ -1.41
NCKAP1-208ENST00000495619 CLCA1A8K7I4 914 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 KPNA5O15131 536 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 TMEM225BP0DP42 221 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 MYL4P12829 197 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 ADRA1DP25100 572 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 EPHB2P29323 1055 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 STT3AP46977 705 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 DIO1P49895 249 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 TXNL4AP83876 142 aaKnown RBP6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 PSG6Q00889 435 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 DPP9Q86TI2 863 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 FAM71DQ8N9W8 422 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 PJA1Q8NG27 643 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 MBD3L2Q8NHZ7 208 aaPredicted RBP6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 ABHD5Q8WTS1 349 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 RITA1Q96K30 269 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 CINPQ9BW66 212 aaPredicted RBP6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 STARD7Q9NQZ5 370 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 RIMKLBQ9ULI2 386 aa6.24□□□□□ -1.41
NCKAP1-208ENST00000495619 FER1L4A9Z1Z3 1794 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 SPRY2O43597 315 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 LATS1O95835 1130 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 PRR35P0CG20 571 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 LMO1P25800 156 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 DGKQP52824 942 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 HTRA4P83105 476 aaPredicted RBP6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 MTX3Q5HYI7 312 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 FAXCQ5TGI0 409 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 RRAGBQ5VZM2 374 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 NEK8Q86SG6 692 aa6.23□□□□□ -1.41
NCKAP1-208ENST00000495619 KRT73Q86Y46 540 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms