RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 RHBDF2Q6PJF5 856 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 PRR23BQ6ZRT6 265 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 BBS7Q8IWZ6 715 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 OVCA2Q8WZ82 227 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 NDRG1Q92597 394 aaKnown RBP11.21□□□□□ -0.61
NELFE-213ENST00000494956 DHTKD1Q96HY7 919 aaPredicted RBP11.21□□□□□ -0.61
NELFE-213ENST00000494956 HHIPQ96QV1 700 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 ZDHHC4Q9NPG8 344 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 HOOK1Q9UJC3 728 aaKnown RBP11.21□□□□□ -0.61
NELFE-213ENST00000494956 COQ4Q9Y3A0 265 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 EP300Q09472 2414 aaPredicted RBP11.2□□□□□ -0.62
NELFE-213ENST00000494956 OTOGLQ3ZCN5 2332 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 RALGAPA1Q6GYQ0 2036 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 K7EQS6 105 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 TRIM24O15164 1050 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 STX10O60499 249 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 TLR5O60602 858 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 NFATC1O95644 943 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 PFKLP17858 780 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 FMO5P49326 533 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 KDSRQ06136 332 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 STIM1Q13586 685 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 CUL2Q13617 745 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 LY6G5CQ5SRR4 150 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 EMC10Q5UCC4 262 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 SNX30Q5VWJ9 437 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 SCD5Q86SK9 330 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 TTC30AQ86WT1 665 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 ELOA2Q8IYF1 753 aaPredicted RBP11.2□□□□□ -0.62
NELFE-213ENST00000494956 UBR7Q8N806 425 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 NAT16Q8N8M0 369 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 RUBCNQ92622 972 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 TMEM176AQ96HP8 235 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 IER2Q9BTL4 223 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 DUSP16Q9BY84 665 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 EPC1Q9H2F5 836 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 FBXO44Q9H4M3 255 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 NCDNQ9UBB6 729 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 SCML2Q9UQR0 700 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 SH3BP1Q9Y3L3 701 aa11.2□□□□□ -0.62
NELFE-213ENST00000494956 DMDP11532 3685 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 SDK1Q7Z5N4 2213 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 RNF225M0QZC1 329 aaPredicted RBP11.19□□□□□ -0.62
NELFE-213ENST00000494956 GREM1O60565 184 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 PAPSS2O95340 614 aaPredicted RBP11.19□□□□□ -0.62
NELFE-213ENST00000494956 RARGP13631 454 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 DRD1P21728 446 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 KIF11P52732 1056 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 NR1H3Q13133 447 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 PPP2R5DQ14738 602 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 GOLGA7BQ2TAP0 167 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 C2orf27AQ580R0 203 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 PIGZQ86VD9 579 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 ARHGEF19Q8IW93 802 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 SYNPOQ8N3V7 929 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 CCDC33Q8N5R6 958 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 LMO3Q8TAP4 145 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 UBA3Q8TBC4 463 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 P2RY11Q96G91 374 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 MED15Q96RN5 788 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 KLF16Q9BXK1 252 aaPredicted RBP11.19□□□□□ -0.62
NELFE-213ENST00000494956 SRRTQ9BXP5 876 aaKnown RBP11.19□□□□□ -0.62
NELFE-213ENST00000494956 FAM126AQ9BYI3 521 aaPredicted RBP11.19□□□□□ -0.62
NELFE-213ENST00000494956 NACA2Q9H009 215 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 PARD6AQ9NPB6 346 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 TLR8Q9NR97 1041 aaKnown RBP11.19□□□□□ -0.62
NELFE-213ENST00000494956 COMMD8Q9NX08 183 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 NAGPAQ9UK23 515 aa11.19□□□□□ -0.62
NELFE-213ENST00000494956 MYO18AQ92614 2054 aaKnown RBP11.19□□□□□ -0.62
NELFE-213ENST00000494956 E2F8A0AVK6 867 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 HMBSP08397 361 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 ADH5P11766 374 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 HNRNPLP14866 589 aaKnown RBP eCLIP11.18□□□□□ -0.62
NELFE-213ENST00000494956 CD19P15391 556 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 TUBP50607 506 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 NRLP54845 237 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 AMPD2Q01433 879 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 PDE4CQ08493 712 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 PAK1Q13153 545 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 SIM2Q14190 667 aaPredicted RBP11.18□□□□□ -0.62
NELFE-213ENST00000494956 ARHGAP17Q68EM7 881 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 TPGS1Q6ZTW0 290 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 RRAGAQ7L523 313 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 LONP2Q86WA8 852 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 DDX42Q86XP3 938 aaKnown RBP eCLIP11.18□□□□□ -0.62
NELFE-213ENST00000494956 TMEM25Q86YD3 366 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 MIB1Q86YT6 1006 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 TFAP2BQ92481 460 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 BHMTQ93088 406 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 ERLEC1Q96DZ1 483 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 CEP63Q96MT8 703 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 ZSWIM1Q9BR11 485 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 CYLDQ9NQC7 956 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.18□□□□□ -0.62
NELFE-213ENST00000494956 CHMP5Q9NZZ3 219 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 TSPAN16Q9UKR8 245 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 SLC8A2Q9UPR5 921 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 INVSQ9Y283 1065 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 USP3Q9Y6I4 520 aa11.18□□□□□ -0.62
NELFE-213ENST00000494956 GVINP1Q7Z2Y8 2422 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms