RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CCSER2Q9H7U1 834 aa24.61■■□□□ 1.53
COL27A1-208ENST00000494780 CSNK1G1Q9HCP0 422 aa24.61■■□□□ 1.53
COL27A1-208ENST00000494780 POLMQ9NP87 494 aaPredicted RBP24.61■■□□□ 1.53
COL27A1-208ENST00000494780 USP25Q9UHP3 1055 aa24.61■■□□□ 1.53
COL27A1-208ENST00000494780 SGK1O00141 431 aa24.6■■□□□ 1.53
COL27A1-208ENST00000494780 IKBKBO14920 756 aa24.6■■□□□ 1.53
COL27A1-208ENST00000494780 MYL1P05976 194 aa24.6■■□□□ 1.53
COL27A1-208ENST00000494780 HNRNPLP14866 589 aaKnown RBP eCLIP24.6■■□□□ 1.53
COL27A1-208ENST00000494780 BCKDHBP21953 392 aa24.6■■□□□ 1.53
COL27A1-208ENST00000494780 NDST1P52848 882 aa24.6■■□□□ 1.53
COL27A1-208ENST00000494780 KDSRQ06136 332 aa24.6■■□□□ 1.53
COL27A1-208ENST00000494780 PKP1Q13835 747 aa24.6■■□□□ 1.53
COL27A1-208ENST00000494780 PREPLQ4J6C6 727 aaPredicted RBP24.6■■□□□ 1.53
COL27A1-208ENST00000494780 BTBD8Q5XKL5 378 aa24.6■■□□□ 1.53
COL27A1-208ENST00000494780 TTC30AQ86WT1 665 aa24.6■■□□□ 1.53
COL27A1-208ENST00000494780 ZMIZ2Q8NF64 920 aa24.6■■□□□ 1.53
COL27A1-208ENST00000494780 SMOQ99835 787 aa24.6■■□□□ 1.53
COL27A1-208ENST00000494780 FBXO44Q9H4M3 255 aa24.6■■□□□ 1.53
COL27A1-208ENST00000494780 HOXC11O43248 304 aaPredicted RBP24.59■■□□□ 1.53
COL27A1-208ENST00000494780 KCNK5O95279 499 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 ASS1P00966 412 aaKnown RBP24.59■■□□□ 1.53
COL27A1-208ENST00000494780 CCDC130P13994 396 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 PMLP29590 882 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 EMC10Q5UCC4 262 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 SV2AQ7L0J3 742 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 CYP2U1Q7Z449 544 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 ETFBKMTQ8IXQ9 262 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 PHTF2Q8N3S3 785 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 SLC2A14Q8TDB8 520 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 WHAMMQ8TF30 809 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 NACA2Q9H009 215 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 ANGPTL2Q9UKU9 493 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 FRMD4BQ9Y2L6 1034 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 ABCA7Q8IZY2 2146 aa24.59■■□□□ 1.53
COL27A1-208ENST00000494780 MYOFQ9NZM1 2061 aa24.58■■□□□ 1.53
COL27A1-208ENST00000494780 KMT2BQ9UMN6 2715 aaPredicted RBP24.58■■□□□ 1.53
COL27A1-208ENST00000494780 KHNYNO15037 678 aaKnown RBP24.58■■□□□ 1.53
COL27A1-208ENST00000494780 TRIM21P19474 475 aaKnown RBP24.58■■□□□ 1.53
COL27A1-208ENST00000494780 CMA1P23946 247 aa24.58■■□□□ 1.53
COL27A1-208ENST00000494780 P2RY2P41231 377 aa24.58■■□□□ 1.53
COL27A1-208ENST00000494780 BBS7Q8IWZ6 715 aa24.58■■□□□ 1.53
COL27A1-208ENST00000494780 KCNV2Q8TDN2 545 aa24.58■■□□□ 1.53
COL27A1-208ENST00000494780 SPACA7Q96KW9 195 aa24.58■■□□□ 1.53
COL27A1-208ENST00000494780 TLR8Q9NR97 1041 aaKnown RBP24.58■■□□□ 1.53
COL27A1-208ENST00000494780 SPHK2Q9NRA0 654 aa24.58■■□□□ 1.53
COL27A1-208ENST00000494780 HMGXB4Q9UGU5 601 aa24.58■■□□□ 1.53
COL27A1-208ENST00000494780 CHD8Q9HCK8 2581 aa24.58■■□□□ 1.53
COL27A1-208ENST00000494780 A0A1B0GVL5 298 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 LNP1A1A4G5 178 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 TBC1D3BA6NDS4 549 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 MAPK13O15264 365 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 CALUO43852 315 aaPredicted RBP24.57■■□□□ 1.52
COL27A1-208ENST00000494780 TLR5O60602 858 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 BEST1O76090 585 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 PFKFB1P16118 471 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 ASPAP45381 313 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 DHPSP49366 369 aaPredicted RBP24.57■■□□□ 1.52
COL27A1-208ENST00000494780 MAP3K7CLP57077 242 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 ORC1Q13415 861 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 CEP135Q66GS9 1140 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 NUDT18Q6ZVK8 323 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 CHAMP1Q96JM3 812 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 BCCIPQ9P287 314 aaKnown RBP eCLIP24.57■■□□□ 1.52
COL27A1-208ENST00000494780 DEC1Q9P2X7 70 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 TRAF3IP3Q9Y228 551 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 NUP205Q92621 2012 aa24.57■■□□□ 1.52
COL27A1-208ENST00000494780 THADAQ6YHU6 1953 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 C4orf47A7E2U8 309 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 ADAM23O75077 832 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 TULP3O75386 442 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 KIF20AO95235 890 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 FAM200BP0CF97 657 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 PIK3CAP42336 1068 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 SHC2P98077 582 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 BYSLQ13895 437 aaKnown RBP24.56■■□□□ 1.52
COL27A1-208ENST00000494780 ST3GAL2Q16842 350 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 ANO4Q32M45 955 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 C1orf220Q5T0J3 134 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 DAB2IPQ5VWQ8 1189 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 SPOPLQ6IQ16 392 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 HTR3DQ70Z44 454 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 TRMT11Q7Z4G4 463 aaKnown RBP24.56■■□□□ 1.52
COL27A1-208ENST00000494780 TMEM25Q86YD3 366 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 NAT16Q8N8M0 369 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 C12orf29Q8N999 325 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 WBP2Q969T9 261 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 FAM49BQ9NUQ9 324 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 HPSEQ9Y251 543 aa24.56■■□□□ 1.52
COL27A1-208ENST00000494780 HLA-DRAP01903 254 aa24.55■■□□□ 1.52
COL27A1-208ENST00000494780 IRF1P10914 325 aa24.55■■□□□ 1.52
COL27A1-208ENST00000494780 PGFP49763 221 aa24.55■■□□□ 1.52
COL27A1-208ENST00000494780 VAMP7P51809 220 aa24.55■■□□□ 1.52
COL27A1-208ENST00000494780 INCA1Q0VD86 236 aa24.55■■□□□ 1.52
COL27A1-208ENST00000494780 LPCAT2Q7L5N7 544 aa24.55■■□□□ 1.52
COL27A1-208ENST00000494780 HMGB4Q8WW32 186 aa24.55■■□□□ 1.52
COL27A1-208ENST00000494780 RLN3Q8WXF3 142 aa24.55■■□□□ 1.52
COL27A1-208ENST00000494780 HNRNPABQ99729 332 aaKnown RBP24.55■■□□□ 1.52
COL27A1-208ENST00000494780 KLF16Q9BXK1 252 aaPredicted RBP24.55■■□□□ 1.52
COL27A1-208ENST00000494780 CYLDQ9NQC7 956 aa24.55■■□□□ 1.52
COL27A1-208ENST00000494780 MAP1BP46821 2468 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms