RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 MYL10Q9BUA6 226 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 C2orf49Q9BVC5 232 aaPredicted RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 TSSK1BQ9BXA7 367 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TMEM120AQ9BXJ8 343 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TDRD1Q9BXT4 1180 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 NIFKQ9BYG3 293 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 NUF2Q9BZD4 464 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 DCLK3Q9C098 648 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ZCCHC2Q9C0B9 1178 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 PUS7LQ9H0K6 701 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 WWP1Q9H0M0 922 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 SEMA6BQ9H3T3 888 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 STN1Q9H668 368 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 C10orf88Q9H8K7 445 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 PARVGQ9HBI0 331 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 SLC38A10Q9HBR0 1119 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ZNF287Q9HBT7 754 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 MOV10Q9HCE1 1003 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 MLXIPLQ9NP71 852 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 NPHS2Q9NP85 383 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 SLCO1B3Q9NPD5 702 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 PRDM11Q9NQV5 511 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 VPS45Q9NRW7 570 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 FKBP14Q9NWM8 211 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 RRN3Q9NYV6 651 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TAS2R1Q9NYW7 299 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 IL20Q9NYY1 176 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 NCKIPSDQ9NZQ3 722 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TMOD2Q9NZR1 351 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 KLK14Q9P0G3 267 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 C6orf203Q9P0P8 240 aaPredicted RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 TMEM9Q9P0T7 183 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 SEPT3Q9UH03 358 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 SLC7A8Q9UHI5 535 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TAGLN3Q9UI15 199 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 SLC24A2Q9UI40 661 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 SERPINA10Q9UK55 444 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 DNAJC12Q9UKB3 198 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 GTF3C4Q9UKN8 822 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 HDAC9Q9UKV0 1011 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 CNOT11Q9UKZ1 510 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 DSEQ9UL01 958 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 DENND2AQ9ULE3 1009 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 LRFN2Q9ULH4 789 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 GRID1Q9ULK0 1009 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 SOX13Q9UN79 622 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 PSMD13Q9UNM6 376 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 EXOC7Q9UPT5 735 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 LZTS1Q9Y250 596 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 MTO1Q9Y2Z2 717 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 IFT52Q9Y366 437 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 NEU2Q9Y3R4 380 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 COL4A3BPQ9Y5P4 624 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 SCINQ9Y6U3 715 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 SPATA31A1Q5TZJ5 1347 aa2.84□□□□□ -1.96
MDC1-208ENST00000494654 SPATA31A5Q5VU36 1347 aa2.84□□□□□ -1.96
MDC1-208ENST00000494654 SPATA31A7Q8IWB4 1347 aa2.84□□□□□ -1.96
MDC1-208ENST00000494654 IGSF9BQ9UPX0 1349 aa2.84□□□□□ -1.96
MDC1-208ENST00000494654 THSD7AQ9UPZ6 1657 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 EXOC1LA0A1B0GW35 172 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 A0A1W2PNR3 127 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SERTM1A2A2V5 107 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 BTBD11A6QL63 1104 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 SYCE1LA8MT33 242 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 NOTOA8MTQ0 251 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 FADS2P1A8MWK0 482 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CAPN14A8MX76 684 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CENPBD1B2RD01 187 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 E9PMD0 336 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 H0YJX3 145 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 H3BRJ5 948 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 M0QX08 132 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 EYA2O00167 538 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 RNF103O00237 685 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 KPNA4O00629 521 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 FCHO1O14526 889 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 KLF11O14901 512 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 NKRFO15226 690 aaKnown RBP eCLIP2.83□□□□□ -1.96
MDC1-208ENST00000494654 XPOTO43592 962 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 FAM189A1O60320 539 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 DNAJA2O60884 412 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 LRRN2O75325 713 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 JRKO75564 520 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 BBOX1O75936 387 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 MTA2O94776 668 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 UFL1O94874 794 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 FBXO21O94952 628 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 CRTAMO95727 393 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 APOEP02649 317 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 S100BP04271 92 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 PCCAP05165 728 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 RBP3P10745 1247 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 PCP11498 1178 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 PABPC1P11940 636 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 FCER1AP12319 257 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 MYCLP1P12525 358 aaPredicted RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 EEF2P13639 858 aaKnown RBP2.83□□□□□ -1.96
MDC1-208ENST00000494654 CCDC130P13994 396 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 PDE6AP16499 860 aa2.83□□□□□ -1.96
MDC1-208ENST00000494654 VCLP18206 1134 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms