RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SNX21Q969T3 373 aa8.78□□□□□ -1
RIF1-211ENST00000494333 C18orf25Q96B23 403 aaPredicted RBP8.78□□□□□ -1
RIF1-211ENST00000494333 ZNF707Q96C28 371 aaPredicted RBP8.78□□□□□ -1
RIF1-211ENST00000494333 FAM122AQ96E09 287 aa8.78□□□□□ -1
RIF1-211ENST00000494333 WDR6Q9NNW5 1121 aaKnown RBP8.78□□□□□ -1
RIF1-211ENST00000494333 SEMA3GQ9NS98 782 aa8.78□□□□□ -1
RIF1-211ENST00000494333 ZDHHC7Q9NXF8 308 aa8.78□□□□□ -1
RIF1-211ENST00000494333 SUCOQ9UBS9 1254 aaKnown RBP8.78□□□□□ -1
RIF1-211ENST00000494333 KCNH3Q9ULD8 1083 aa8.78□□□□□ -1
RIF1-211ENST00000494333 NUB1Q9Y5A7 615 aa8.78□□□□□ -1
RIF1-211ENST00000494333 H3BS24 57 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 SMAD7O15105 426 aaKnown RBP8.77□□□□□ -1.01
RIF1-211ENST00000494333 N4BP1O75113 896 aaKnown RBP8.77□□□□□ -1.01
RIF1-211ENST00000494333 C8AP07357 584 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 HSP90AA1P07900 732 aaKnown RBP8.77□□□□□ -1.01
RIF1-211ENST00000494333 CXCL8P10145 99 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 SCP2P22307 547 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 CD96P40200 585 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 TNFSF9P41273 254 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 PMS1P54277 932 aaKnown RBP8.77□□□□□ -1.01
RIF1-211ENST00000494333 GTF2BQ00403 316 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 RAB33AQ14088 237 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 PPM1LQ5SGD2 360 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 LIN9Q5TKA1 542 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 TDRD10Q5VZ19 366 aaKnown RBP8.77□□□□□ -1.01
RIF1-211ENST00000494333 RSPO2Q6UXX9 243 aaPredicted RBP8.77□□□□□ -1.01
RIF1-211ENST00000494333 ANKS3Q6ZW76 656 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 ZNF720Q7Z2F6 126 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 SUGP1Q8IWZ8 645 aaKnown RBP8.77□□□□□ -1.01
RIF1-211ENST00000494333 UBALD2Q8IYN6 164 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 KCNN1Q92952 543 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 ASIC4Q96FT7 647 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 FIZ1Q96SL8 496 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 RHOBTB2Q9BYZ6 727 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 DUSP15Q9H1R2 295 aaPredicted RBP8.77□□□□□ -1.01
RIF1-211ENST00000494333 SMOC2Q9H3U7 446 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 PLEKHA5Q9HAU0 1116 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 KCNK12Q9HB15 430 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 MTRRQ9UBK8 725 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 SLC5A6Q9Y289 635 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 BACE2Q9Y5Z0 518 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 CDY1Q9Y6F8 540 aa8.77□□□□□ -1.01
RIF1-211ENST00000494333 A0A0B4J269 797 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 TTC26A0AVF1 554 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 MYMKA6NI61 221 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 LACTBL1A8MY62 500 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 ANKRD63C9JTQ0 380 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 SYN3O14994 580 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 OGTO15294 1046 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 WNT11O96014 354 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 PIGRP01833 764 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 ABCD1P33897 745 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 PLA2G5P39877 138 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 ARPP19P56211 112 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 STK38Q15208 465 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 ZBTB6Q15916 424 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 KYAT1Q16773 422 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 ZBTB41Q5SVQ8 909 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 AXDND1Q5T1B0 1012 aaPredicted RBP8.76□□□□□ -1.01
RIF1-211ENST00000494333 CCDC73Q6ZRK6 1079 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 GRASPQ7Z6J2 395 aaPredicted RBP8.76□□□□□ -1.01
RIF1-211ENST00000494333 SFR1Q86XK3 245 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 WFDC3Q8IUB2 231 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 HSCBQ8IWL3 235 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 Q8N3U1 123 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 PDILTQ8N807 584 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 LINC00301Q8NCQ3 95 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 ZNF461Q8TAF7 563 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 SLC7A14Q8TBB6 771 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 UBE2FQ969M7 185 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 ZNF396Q96N95 335 aaPredicted RBP8.76□□□□□ -1.01
RIF1-211ENST00000494333 MYADMQ96S97 322 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 MSTO1Q9BUK6 570 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 RPF1Q9H9Y2 349 aaKnown RBP8.76□□□□□ -1.01
RIF1-211ENST00000494333 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.76□□□□□ -1.01
RIF1-211ENST00000494333 TBC1D7Q9P0N9 293 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 TUBGCP4Q9UGJ1 667 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 FBXW11Q9UKB1 542 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 C5orf42Q9H799 3197 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 CLUHO75153 1309 aa8.76□□□□□ -1.01
RIF1-211ENST00000494333 A0A087X0B3 334 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 WASH4PA8MWX3 477 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 H7C4K7 107 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 SPTLC2O15270 562 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 CCL16O15467 120 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 PAPLNO95428 1278 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 PDGFBP01127 241 aaPredicted RBP8.75□□□□□ -1.01
RIF1-211ENST00000494333 HNRNPA1P09651 372 aaKnown RBP eCLIP8.75□□□□□ -1.01
RIF1-211ENST00000494333 SRFP11831 508 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 LAMP2P13473 410 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 IDEP14735 1019 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 CYP3A5P20815 502 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 AVPR2P30518 371 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 STAT6P42226 847 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 ACOT2P49753 483 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 NTHL1P78549 312 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 TDGQ13569 410 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 CTXN3Q4LDR2 81 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 ADALQ6DHV7 355 aa8.75□□□□□ -1.01
RIF1-211ENST00000494333 SLFN12LQ6IEE8 588 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms