RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 RIMKLBQ9ULI2 386 aa6.79□□□□□ -1.32
MSL3-217ENST00000494268 COX11Q9Y6N1 276 aa6.79□□□□□ -1.32
MSL3-217ENST00000494268 CCDC194A0A1B0GVG4 234 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 CES2O00748 559 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 SPRY2O43597 315 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 PLIN1O60240 522 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 DLDP09622 509 aaKnown RBP6.78□□□□□ -1.32
MSL3-217ENST00000494268 MYL4P12829 197 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 MTHFSP49914 203 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 SLC35G1Q2M3R5 365 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 CEP85Q6P2H3 762 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 KIAA0408Q6ZU52 694 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 WDYHV1Q96HA8 205 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 ZC3H10Q96K80 434 aaKnown RBP6.78□□□□□ -1.32
MSL3-217ENST00000494268 SGCZQ96LD1 299 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 ELAC2Q9BQ52 826 aaKnown RBP6.78□□□□□ -1.32
MSL3-217ENST00000494268 THAP7Q9BT49 309 aaPredicted RBP6.78□□□□□ -1.32
MSL3-217ENST00000494268 SLC25A32Q9H2D1 315 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 CERS4Q9HA82 394 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 SH3BP4Q9P0V3 963 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 SERGEFQ9UGK8 458 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 SLC27A6Q9Y2P4 619 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 PCDHGB2Q9Y5G2 931 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 WNT6Q9Y6F9 365 aa6.78□□□□□ -1.32
MSL3-217ENST00000494268 AOX1Q06278 1338 aa6.77□□□□□ -1.32
MSL3-217ENST00000494268 TARM1B6A8C7 271 aa6.77□□□□□ -1.33
MSL3-217ENST00000494268 KCNQ3O43525 872 aa6.77□□□□□ -1.33
MSL3-217ENST00000494268 IFIT2P09913 472 aaKnown RBP6.77□□□□□ -1.33
MSL3-217ENST00000494268 NHLRC4P0CG21 123 aaPredicted RBP6.77□□□□□ -1.33
MSL3-217ENST00000494268 GABRB3P28472 473 aa6.77□□□□□ -1.33
MSL3-217ENST00000494268 SERPINB3P29508 390 aa6.77□□□□□ -1.33
MSL3-217ENST00000494268 COPAP53621 1224 aa6.77□□□□□ -1.33
MSL3-217ENST00000494268 RNASE12Q5GAN4 147 aaKnown RBP6.77□□□□□ -1.33
MSL3-217ENST00000494268 RAP1GAP2Q684P5 730 aa6.77□□□□□ -1.33
MSL3-217ENST00000494268 MZT2AQ6P582 158 aa6.77□□□□□ -1.33
MSL3-217ENST00000494268 RAB11FIP4Q86YS3 637 aa6.77□□□□□ -1.33
MSL3-217ENST00000494268 FAM186BQ8IYM0 893 aa6.77□□□□□ -1.33
MSL3-217ENST00000494268 SIRT6Q8N6T7 355 aa6.77□□□□□ -1.33
MSL3-217ENST00000494268 GLIS1Q8NBF1 620 aa6.77□□□□□ -1.33
MSL3-217ENST00000494268 CCDC150Q8NCX0 1101 aa6.77□□□□□ -1.33
MSL3-217ENST00000494268 NTN5Q8WTR8 489 aaPredicted RBP6.77□□□□□ -1.33
MSL3-217ENST00000494268 ZNF668Q96K58 619 aaPredicted RBP6.77□□□□□ -1.33
MSL3-217ENST00000494268 EXOC3O60645 756 aa6.76□□□□□ -1.33
MSL3-217ENST00000494268 SNX2O60749 519 aa6.76□□□□□ -1.33
MSL3-217ENST00000494268 FGAP02671 866 aa6.76□□□□□ -1.33
MSL3-217ENST00000494268 CREB1P16220 341 aa6.76□□□□□ -1.33
MSL3-217ENST00000494268 PROK1P58294 105 aa6.76□□□□□ -1.33
MSL3-217ENST00000494268 GJA10Q969M2 543 aa6.76□□□□□ -1.33
MSL3-217ENST00000494268 ZNF566Q969W8 418 aa6.76□□□□□ -1.33
MSL3-217ENST00000494268 PCDHAC1Q9H158 963 aa6.76□□□□□ -1.33
MSL3-217ENST00000494268 NKX1-2Q9UD57 310 aaPredicted RBP6.76□□□□□ -1.33
MSL3-217ENST00000494268 AMFRQ9UKV5 643 aa6.76□□□□□ -1.33
MSL3-217ENST00000494268 ASAP1Q9ULH1 1129 aa6.76□□□□□ -1.33
MSL3-217ENST00000494268 ZMYND8Q9ULU4 1186 aaPredicted RBP6.76□□□□□ -1.33
MSL3-217ENST00000494268 FAM234BA2RU67 622 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 PROP1O75360 226 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 JTBO76095 146 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 ARP10275 920 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 ABCB4P21439 1286 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 EEF1GP26641 437 aaKnown RBP6.75□□□□□ -1.33
MSL3-217ENST00000494268 MCM5P33992 734 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 SUMO2P61956 95 aaKnown RBP6.75□□□□□ -1.33
MSL3-217ENST00000494268 TFF2Q03403 129 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 UBE4AQ14139 1066 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 TMEM119Q4V9L6 283 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 XRRA1Q6P2D8 792 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 PTCHD4Q6ZW05 846 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 CCDC28AQ8IWP9 274 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 CYP2W1Q8TAV3 490 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 ZDHHC12Q96GR4 267 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 SLC39A13Q96H72 371 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 SNX27Q96L92 541 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 PCGF6Q9BYE7 350 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 ZBTB26Q9HCK0 441 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 NLRC4Q9NPP4 1024 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 SLC52A1Q9NWF4 448 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 MGAT4CQ9UBM8 478 aa6.75□□□□□ -1.33
MSL3-217ENST00000494268 SMIM22K7EJ46 135 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 COQ9O75208 318 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 MYCLP12524 364 aaPredicted RBP6.74□□□□□ -1.33
MSL3-217ENST00000494268 HTR7P34969 479 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 HSPA7P48741 367 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 DIO1P49895 249 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 HOXA4Q00056 320 aaPredicted RBP6.74□□□□□ -1.33
MSL3-217ENST00000494268 DEUP1Q05D60 604 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 MPEG1Q2M385 716 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 FAXCQ5TGI0 409 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 ABLIM2Q6H8Q1 611 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 MTHFD1LQ6UB35 978 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 ZNF788Q6ZQV5 615 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 ZNF804AQ7Z570 1209 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 FSTL5Q8N475 847 aaPredicted RBP6.74□□□□□ -1.33
MSL3-217ENST00000494268 TERB1Q8NA31 727 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 DEPTORQ8TB45 409 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 CIPCQ9C0C6 399 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.74□□□□□ -1.334e-7■■■■□ 22.9
MSL3-217ENST00000494268 ZNF700Q9H0M5 742 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 CEP83Q9Y592 693 aa6.74□□□□□ -1.33
MSL3-217ENST00000494268 COL15A1P39059 1388 aa6.73□□□□□ -1.33
MSL3-217ENST00000494268 MANSC4A6NHS7 340 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms