RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 OTUB2Q96DC9 234 aa25.3■■□□□ 1.64
TTC3-224ENST00000494243 DUSP9Q99956 384 aaKnown RBP25.3■■□□□ 1.64
TTC3-224ENST00000494243 TRAF3IP3Q9Y228 551 aa25.3■■□□□ 1.64
TTC3-224ENST00000494243 ZDHHC9Q9Y397 364 aa25.3■■□□□ 1.64
TTC3-224ENST00000494243 APODP05090 189 aa25.29■■□□□ 1.64
TTC3-224ENST00000494243 GRIA2P42262 883 aa25.29■■□□□ 1.64
TTC3-224ENST00000494243 CREB5Q02930 508 aa25.29■■□□□ 1.64
TTC3-224ENST00000494243 CEP135Q66GS9 1140 aa25.29■■□□□ 1.64
TTC3-224ENST00000494243 PMS2CLQ68D20 193 aa25.29■■□□□ 1.64
TTC3-224ENST00000494243 UNC93AQ86WB7 457 aa25.29■■□□□ 1.64
TTC3-224ENST00000494243 OLIG1Q8TAK6 271 aa25.29■■□□□ 1.64
TTC3-224ENST00000494243 ARHGEF4Q9NR80 690 aa25.29■■□□□ 1.64
TTC3-224ENST00000494243 FAM237AA0A1B0GTK4 181 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 SGK1O00141 431 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 KLF8O95600 359 aaPredicted RBP25.28■■□□□ 1.64
TTC3-224ENST00000494243 CAVIN2O95810 425 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 HLA-DRAP01903 254 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 PRR29P0C7W0 189 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 BCKDHBP21953 392 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 GBP1P32455 592 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 TIE1P35590 1138 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 MAP3K7CLP57077 242 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 BBS7Q8IWZ6 715 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 ETFBKMTQ8IXQ9 262 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 TXNDC5Q8NBS9 432 aaKnown RBP25.28■■□□□ 1.64
TTC3-224ENST00000494243 FAM49BQ9NUQ9 324 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 FRMD4BQ9Y2L6 1034 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 SH3BP1Q9Y3L3 701 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 ABCA7Q8IZY2 2146 aa25.28■■□□□ 1.64
TTC3-224ENST00000494243 MAPK13O15264 365 aa25.27■■□□□ 1.64
TTC3-224ENST00000494243 GREM1O60565 184 aa25.27■■□□□ 1.64
TTC3-224ENST00000494243 TNFRSF4P43489 277 aa25.27■■□□□ 1.64
TTC3-224ENST00000494243 VAMP7P51809 220 aa25.27■■□□□ 1.64
TTC3-224ENST00000494243 GAD2Q05329 585 aa25.27■■□□□ 1.64
TTC3-224ENST00000494243 KDSRQ06136 332 aa25.27■■□□□ 1.64
TTC3-224ENST00000494243 HSF5Q4G112 596 aaPredicted RBP25.27■■□□□ 1.64
TTC3-224ENST00000494243 TMEM25Q86YD3 366 aa25.27■■□□□ 1.64
TTC3-224ENST00000494243 SPATA32Q96LK8 384 aa25.27■■□□□ 1.64
TTC3-224ENST00000494243 TWNKQ96RR1 684 aa25.27■■□□□ 1.64
TTC3-224ENST00000494243 ZDHHC4Q9NPG8 344 aa25.27■■□□□ 1.64
TTC3-224ENST00000494243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.27■■□□□ 1.645e-7■■■■■ 51.8
TTC3-224ENST00000494243 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.26■■□□□ 1.63
TTC3-224ENST00000494243 HHLA1C9JL84 531 aa25.26■■□□□ 1.63
TTC3-224ENST00000494243 HOXC11O43248 304 aaPredicted RBP25.26■■□□□ 1.63
TTC3-224ENST00000494243 CALUO43852 315 aaPredicted RBP25.26■■□□□ 1.63
TTC3-224ENST00000494243 ADAM23O75077 832 aa25.26■■□□□ 1.63
TTC3-224ENST00000494243 RHOBTB3O94955 611 aa25.26■■□□□ 1.63
TTC3-224ENST00000494243 PIK3CAP42336 1068 aa25.26■■□□□ 1.63
TTC3-224ENST00000494243 NDUFA8P51970 172 aa25.26■■□□□ 1.63
TTC3-224ENST00000494243 NFIL3Q16649 462 aa25.26■■□□□ 1.63
TTC3-224ENST00000494243 GPRIN1Q7Z2K8 1008 aa25.26■■□□□ 1.63
TTC3-224ENST00000494243 C11orf74Q86VG3 221 aa25.26■■□□□ 1.63
TTC3-224ENST00000494243 NAT16Q8N8M0 369 aa25.26■■□□□ 1.63
TTC3-224ENST00000494243 HNRNPABQ99729 332 aaKnown RBP25.26■■□□□ 1.63
TTC3-224ENST00000494243 FBXO44Q9H4M3 255 aa25.26■■□□□ 1.63
TTC3-224ENST00000494243 APOBEC3GQ9HC16 384 aaKnown RBP25.26■■□□□ 1.63
TTC3-224ENST00000494243 SPHK2Q9NRA0 654 aa25.26■■□□□ 1.63
TTC3-224ENST00000494243 TPRP12270 2363 aaKnown RBP25.25■■□□□ 1.63
TTC3-224ENST00000494243 TLR5O60602 858 aa25.25■■□□□ 1.63
TTC3-224ENST00000494243 TBX18O95935 607 aa25.25■■□□□ 1.63
TTC3-224ENST00000494243 SYKP43405 635 aa25.25■■□□□ 1.63
TTC3-224ENST00000494243 PPP3CAQ08209 521 aa25.25■■□□□ 1.63
TTC3-224ENST00000494243 INCA1Q0VD86 236 aa25.25■■□□□ 1.63
TTC3-224ENST00000494243 DPYDQ12882 1025 aa25.25■■□□□ 1.63
TTC3-224ENST00000494243 RNF43Q68DV7 783 aa25.25■■□□□ 1.63
TTC3-224ENST00000494243 TTC30AQ86WT1 665 aa25.25■■□□□ 1.63
TTC3-224ENST00000494243 TAS1R2Q8TE23 839 aa25.25■■□□□ 1.63
TTC3-224ENST00000494243 LSM14BQ9BX40 385 aaKnown RBP25.25■■□□□ 1.63
TTC3-224ENST00000494243 KLF16Q9BXK1 252 aaPredicted RBP25.25■■□□□ 1.63
TTC3-224ENST00000494243 TLR8Q9NR97 1041 aaKnown RBP25.25■■□□□ 1.63
TTC3-224ENST00000494243 OSER1Q9NX31 292 aa25.25■■□□□ 1.63
TTC3-224ENST00000494243 MAPK8IP1Q9UQF2 711 aa25.25■■□□□ 1.63
TTC3-224ENST00000494243 TULP3O75386 442 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 IRF1P10914 325 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 KCNA4P22459 653 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 NR2F2P24468 414 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 ADORA2BP29275 332 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 GCLMP48507 274 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 KRT85P78386 507 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 EOGTQ5NDL2 527 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 N4BP2L1Q5TBK1 243 aaPredicted RBP25.24■■□□□ 1.63
TTC3-224ENST00000494243 CLEC20AQ6ZU45 233 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 HTR3DQ70Z44 454 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 WHAMMQ8TF30 809 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 CYLDQ9NQC7 956 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 HCN2Q9UL51 889 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 SCML2Q9UQR0 700 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 ACACBO00763 2458 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 THADAQ6YHU6 1953 aa25.24■■□□□ 1.63
TTC3-224ENST00000494243 ALDH1A2O94788 518 aa25.23■■□□□ 1.63
TTC3-224ENST00000494243 FAM200BP0CF97 657 aa25.23■■□□□ 1.63
TTC3-224ENST00000494243 TRIM49P0CI25 452 aa25.23■■□□□ 1.63
TTC3-224ENST00000494243 TRIM49CP0CI26 452 aa25.23■■□□□ 1.63
TTC3-224ENST00000494243 P2RY2P41231 377 aa25.23■■□□□ 1.63
TTC3-224ENST00000494243 BTBD8Q5XKL5 378 aa25.23■■□□□ 1.63
TTC3-224ENST00000494243 FRMD1Q8N878 549 aa25.23■■□□□ 1.63
TTC3-224ENST00000494243 RLN3Q8WXF3 142 aa25.23■■□□□ 1.63
TTC3-224ENST00000494243 CYFIP2Q96F07 1278 aa25.23■■□□□ 1.63
TTC3-224ENST00000494243 NACA2Q9H009 215 aa25.23■■□□□ 1.63
TTC3-224ENST00000494243 CYP3A43Q9HB55 503 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms