RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 SUN3Q8TAQ9 357 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 ATG4AQ8WYN0 398 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 CPT1BQ92523 772 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 GOLGA1Q92805 767 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 GPR20Q99678 358 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 TTPALQ9BTX7 342 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 SMC4Q9NTJ3 1288 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 RIMKLBQ9ULI2 386 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 NFU1Q9UMS0 254 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 CNTN6Q9UQ52 1028 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 SLC27A6Q9Y2P4 619 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 NOX1Q9Y5S8 564 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 SCINQ9Y6U3 715 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 GAGE12BA1L429 117 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 GAGE12HA6NDE8 117 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 A6NLC8 198 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 MARCH11A6NNE9 402 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 RPP40O75818 363 aaKnown RBP7.01□□□□□ -1.29
SMC2-205ENST00000493955 ZSCAN22P10073 491 aaPredicted RBP7.01□□□□□ -1.29
SMC2-205ENST00000493955 RXRAP19793 462 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 HTR7P34969 479 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 KRT9P35527 623 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 LIFRP42702 1097 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 RXRGP48443 463 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 VAMP2P63027 116 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 RRP1BQ14684 758 aaKnown RBP7.01□□□□□ -1.29
SMC2-205ENST00000493955 CLCA4Q14CN2 919 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 SPDYE7PQ495Y7 208 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 UBXN11Q5T124 520 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 SP5Q6BEB4 398 aaPredicted RBP7.01□□□□□ -1.29
SMC2-205ENST00000493955 CLEC9AQ6UXN8 241 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 NME8Q8N427 588 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 PCYOX1LQ8NBM8 494 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 CEP70Q8NHQ1 597 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 Q8TCH9 128 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 HTRA1Q92743 480 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 BOD1Q96IK1 185 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 C17orf80Q9BSJ5 609 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 SSBP3Q9BWW4 388 aaPredicted RBP7.01□□□□□ -1.29
SMC2-205ENST00000493955 VN1R3Q9BXE9 311 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 TMX4Q9H1E5 349 aaPredicted RBP7.01□□□□□ -1.29
SMC2-205ENST00000493955 INTS13Q9NVM9 706 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 NDUFAF4Q9P032 175 aa7.01□□□□□ -1.29
SMC2-205ENST00000493955 KRTAP23-1A1A580 65 aa7□□□□□ -1.29
SMC2-205ENST00000493955 CBFA2T3O75081 653 aa7□□□□□ -1.29
SMC2-205ENST00000493955 CD4P01730 458 aa7□□□□□ -1.29
SMC2-205ENST00000493955 YY1P25490 414 aa7□□□□□ -1.29
SMC2-205ENST00000493955 CFPP27918 469 aa7□□□□□ -1.29
SMC2-205ENST00000493955 SERPINA4P29622 427 aa7□□□□□ -1.29
SMC2-205ENST00000493955 MCM2P49736 904 aa7□□□□□ -1.29
SMC2-205ENST00000493955 VAV2P52735 878 aa7□□□□□ -1.29
SMC2-205ENST00000493955 FOXD4Q12950 439 aaPredicted RBP7□□□□□ -1.29
SMC2-205ENST00000493955 DLGAP5Q15398 846 aa7□□□□□ -1.29
SMC2-205ENST00000493955 MAP3K21Q5TCX8 1036 aa7□□□□□ -1.29
SMC2-205ENST00000493955 FAM180BQ6P0A1 224 aa7□□□□□ -1.29
SMC2-205ENST00000493955 C1orf122Q6ZSJ8 110 aa7□□□□□ -1.29
SMC2-205ENST00000493955 ANKS1BQ7Z6G8 1248 aa7□□□□□ -1.29
SMC2-205ENST00000493955 IZUMO1Q8IYV9 350 aa7□□□□□ -1.29
SMC2-205ENST00000493955 NACC2Q96BF6 587 aa7□□□□□ -1.29
SMC2-205ENST00000493955 TWNKQ96RR1 684 aa7□□□□□ -1.29
SMC2-205ENST00000493955 ALOXE3Q9BYJ1 711 aa7□□□□□ -1.29
SMC2-205ENST00000493955 TPSD1Q9BZJ3 242 aa7□□□□□ -1.29
SMC2-205ENST00000493955 GALNT9Q9HCQ5 603 aa7□□□□□ -1.29
SMC2-205ENST00000493955 DBX1A6NMT0 343 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 E7EVH7 732 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 RNASET2O00584 256 aaKnown RBP6.99□□□□□ -1.29
SMC2-205ENST00000493955 ZNF623O75123 536 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 KRT38O76015 456 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 BMP7P18075 431 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 TUBP50607 506 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 CDK7P50613 346 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 CCR5P51681 352 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 TIRAPP58753 221 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 CHRNDQ07001 517 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 MAPK7Q13164 816 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 SMAD1Q15797 465 aaKnown RBP6.99□□□□□ -1.29
SMC2-205ENST00000493955 HS1BP3Q53T59 392 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 TRABD2AQ86V40 505 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 TICAM2Q86XR7 235 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 C1QL4Q86Z23 238 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 SIAH1Q8IUQ4 282 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 SYNE4Q8N205 404 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 ACTRT3Q9BYD9 372 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 AMBRA1Q9C0C7 1298 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 TMEM74BQ9NUR3 256 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 TMEM160Q9NX00 188 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 PI4KBQ9UBF8 816 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 STEAP1Q9UHE8 339 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 MAP3K2Q9Y2U5 619 aa6.99□□□□□ -1.29
SMC2-205ENST00000493955 TRGV11A0A075B6L2 103 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 CCDC196A0A1B0GTZ2 297 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 KIF28PB7ZC32 967 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 NCR1O76036 304 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 CER1O95813 267 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 GATA3P23771 443 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 ATXN1P54253 815 aaKnown RBP6.98□□□□□ -1.29
SMC2-205ENST00000493955 SF3A3Q12874 501 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMC2-205ENST00000493955 ACOX1Q15067 660 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 P3H1Q32P28 736 aa6.98□□□□□ -1.29
SMC2-205ENST00000493955 GALNTL6Q49A17 601 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms