RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 PIWIL1Q96J94 861 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 NOX5Q96PH1 765 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 TASP1Q9H6P5 420 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 SYNCQ9H7C4 482 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 TLR8Q9NR97 1041 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 ABHD10Q9NUJ1 306 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 TAS2R14Q9NYV8 317 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 GDE1Q9NZC3 331 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 LIMD1Q9UGP4 676 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 NR2E1Q9Y466 385 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 AKR1B15C9JRZ8 316 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 TBX18O95935 607 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 SERPING1P05155 500 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 ACADSBP45954 432 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 DAOAP59103 153 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 CLEC16AQ2KHT3 1053 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 TJAP1Q5JTD0 557 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 PHLDB2Q86SQ0 1253 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 ERICH1Q86X53 443 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 TTC16Q8NEE8 873 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 PDZD8Q8NEN9 1154 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 RSAD2Q8WXG1 361 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 OVCA2Q8WZ82 227 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 RNF38Q9H0F5 515 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 CNGB3Q9NQW8 809 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 ARHGAP20Q9P2F6 1191 aa18.78■□□□□ 0.6
PDLIM7-208ENST00000493815 DOCK8Q8NF50 2099 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 TMCO5BA8MYB1 307 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 LOC730098B7Z3J9 87 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 DDX3XO00571 662 aaKnown RBP eCLIP18.77■□□□□ 0.61e-16■■■□□ 15.4
PDLIM7-208ENST00000493815 PRAMEF12O95522 483 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 UNGP13051 313 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 VIPR2P41587 438 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 PPP3CCP48454 512 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 YWHAGP61981 247 aaKnown RBP eCLIP18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 TAF5Q15542 800 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 PARM1Q6UWI2 310 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 MMS22LQ6ZRQ5 1243 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 ARID3BQ8IVW6 561 aaPredicted RBP18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 TC2NQ8N9U0 490 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 EDEM1Q92611 657 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 EPS15L1Q9UBC2 864 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 MYO16Q9Y6X6 1858 aa18.77■□□□□ 0.6
PDLIM7-208ENST00000493815 NCANO14594 1321 aa18.77■□□□□ 0.59
PDLIM7-208ENST00000493815 MDM4O15151 490 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 COCHO43405 550 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 TLR5O60602 858 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 OAS1P00973 400 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 CKMP06732 381 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 ASGR2P07307 311 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 HDCP19113 662 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 HNRNPH3P31942 346 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 HECTD3Q5T447 861 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 SNX30Q5VWJ9 437 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 OR6B2Q6IFH4 312 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 TRIM72Q6ZMU5 477 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 FAM183BPQ6ZVS7 135 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 CNGA4Q8IV77 575 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 CMTM8Q8IZV2 173 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 FGF14Q92915 247 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 ASB16Q96NS5 453 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 KXD1Q9BQD3 176 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 C11orf70Q9BRQ4 267 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 RPP25Q9BUL9 199 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 CD320Q9NPF0 282 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 PRKAG3Q9UGI9 489 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 ADAMTS1Q9UHI8 967 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 CCL26Q9Y258 94 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 OBSL1O75147 1896 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 FBXO21O94952 628 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 RARGP13631 454 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 AVPR1AP37288 418 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 NSFP46459 744 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 BSPRYQ5W0U4 402 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 TANGO2Q6ICL3 276 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 ADAMTS19Q8TE59 1207 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 IPO4Q8TEX9 1081 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 SMARCD2Q92925 531 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 FAM149B1Q96BN6 582 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 C18orf8Q96DM3 657 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 CHP1Q99653 195 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 CYLDQ9NQC7 956 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.76■□□□□ 0.592e-6■■■■□ 24.3
PDLIM7-208ENST00000493815 SMPD4Q9NXE4 827 aa18.76■□□□□ 0.59
PDLIM7-208ENST00000493815 TRAV19A0A0A6YYK7 116 aa18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 GRAP2O75791 330 aa18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 FCARP24071 287 aa18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 DDX6P26196 483 aaKnown RBP eCLIP18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 CDC25BP30305 580 aa18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 EIF4A3P38919 411 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 CENPCQ03188 943 aa18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 ARID5BQ14865 1188 aa18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 TSR1Q2NL82 804 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 C10orf120Q5SQS8 335 aa18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 USP13Q92995 863 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 RSPRY1Q96DX4 576 aa18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 NACA2Q9H009 215 aa18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 ZNHIT6Q9NWK9 470 aaKnown RBP18.75■□□□□ 0.59
PDLIM7-208ENST00000493815 BZW2Q9Y6E2 419 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms