RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 BST2Q10589 180 aaKnown RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 GRB14Q14449 540 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 KCNJ11Q14654 390 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 ZKSCAN8Q15776 578 aaPredicted RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 FAM133BQ5BKY9 247 aaKnown RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 ANKRD22Q5VYY1 191 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 SCYL2Q6P3W7 929 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 SLC26A9Q7LBE3 791 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 PSTKQ8IV42 348 aaKnown RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 CRYBG2Q8N1P7 616 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 ANKRD52Q8NB46 1076 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 FAM172AQ8WUF8 416 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 HSFY1Q96LI6 401 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 RAB3IPQ96QF0 476 aaPredicted RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 PEBP4Q96S96 227 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 PARK7Q99497 189 aaKnown RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 TINF2Q9BSI4 451 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 ECT2Q9H8V3 914 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 NGRNQ9NPE2 291 aaKnown RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 CNTN3Q9P232 1028 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 CITO14578 2027 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 A8MXQ7 604 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 KRT37O76014 449 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 TMEM63AO94886 807 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 PFKMP08237 780 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 TROVE2P10155 538 aaKnown RBP eCLIP10.04□□□□□ -0.8
NPHP3-209ENST00000493732 ALADP13716 330 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 CYP3A5P20815 502 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 FOXN2P32314 431 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 RPA3P35244 121 aaPredicted RBP10.04□□□□□ -0.8
NPHP3-209ENST00000493732 GJA5P36382 358 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 ELF3P78545 371 aaPredicted RBP10.04□□□□□ -0.8
NPHP3-209ENST00000493732 EFHC1Q5JVL4 640 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 HP1BP3Q5SSJ5 553 aaPredicted RBP10.04□□□□□ -0.8
NPHP3-209ENST00000493732 GJC2Q5T442 439 aaPredicted RBP10.04□□□□□ -0.8
NPHP3-209ENST00000493732 PPP1R26Q5T8A7 1209 aaPredicted RBP10.04□□□□□ -0.8
NPHP3-209ENST00000493732 CAPN12Q6ZSI9 719 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 CYP4V2Q6ZWL3 525 aaPredicted RBP10.04□□□□□ -0.8
NPHP3-209ENST00000493732 PLEKHH3Q7Z736 793 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 ACOT1Q86TX2 421 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 ZC3H18Q86VM9 953 aaKnown RBP10.04□□□□□ -0.8
NPHP3-209ENST00000493732 TRIM42Q8IWZ5 723 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 HACE1Q8IYU2 909 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 OR6B3Q8NGW1 331 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 KLHL29Q96CT2 875 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 MAML3Q96JK9 1138 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 TNIP3Q96KP6 325 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 PPP1R16BQ96T49 567 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 TUBB6Q9BUF5 446 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 ADAMTS10Q9H324 1103 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 USP29Q9HBJ7 922 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 PCDH18Q9HCL0 1135 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 RAB6BQ9NRW1 208 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 GDAP2Q9NXN4 497 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 RCOR3Q9P2K3 495 aaPredicted RBP10.04□□□□□ -0.8
NPHP3-209ENST00000493732 ZNF180Q9UJW8 692 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 TEX264Q9Y6I9 313 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 PLXNB2O15031 1838 aa10.04□□□□□ -0.8
NPHP3-209ENST00000493732 MGAMO43451 1857 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 CCL15-CCL14A0A0B4J2E2 113 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 DCAF8L1A6NGE4 600 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 SLC15A5A6NIM6 579 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 HACD1B0YJ81 288 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 KCNN4O15554 427 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 GCATO75600 419 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 CCNB1P14635 433 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 NQO1P15559 274 aaKnown RBP10.03□□□□□ -0.8
NPHP3-209ENST00000493732 SMPD1P17405 629 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 HOXA11P31270 313 aaPredicted RBP10.03□□□□□ -0.8
NPHP3-209ENST00000493732 ELK3P41970 407 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 RPL34P49207 117 aaKnown RBP10.03□□□□□ -0.8
NPHP3-209ENST00000493732 GTF2A1P52655 376 aaPredicted RBP10.03□□□□□ -0.8
NPHP3-209ENST00000493732 ATP11AP98196 1134 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 ADCY1Q08828 1119 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 TAF5Q15542 800 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 DPYSL2Q16555 572 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 CCL15Q16663 113 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 CDO1Q16878 200 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 FAM110CQ1W6H9 321 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 SPRED3Q2MJR0 410 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 C15orf59Q2T9L4 293 aaPredicted RBP10.03□□□□□ -0.8
NPHP3-209ENST00000493732 SV2CQ496J9 727 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 MSS51Q4VC12 460 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 FBXO47Q5MNV8 452 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 C9orf57Q5W0N0 161 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 PMF1Q6P1K2 205 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 LVRNQ6Q4G3 990 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 ALKAL1Q6UXT8 129 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 STRADAQ7RTN6 431 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 GPR142Q7Z601 462 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 RPAINQ86UA6 219 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 SLC26A11Q86WA9 606 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 C4orf33Q8N1A6 199 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 VPS52Q8N1B4 723 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 BANPQ8N9N5 519 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 FBXO41Q8TF61 875 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 DCAKDQ8WVC6 231 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 SLC44A1Q8WWI5 657 aa10.03□□□□□ -0.8
NPHP3-209ENST00000493732 CENPIQ92674 756 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms