RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 RAB32Q13637 225 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 TMEM63BQ5T3F8 832 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 IFIT1BQ5T764 474 aaKnown RBP5.14□□□□□ -1.59
SMC4-223ENST00000493695 PIP4P1Q86T03 277 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 DAAM2Q86T65 1068 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 ZFYVE19Q96K21 471 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 ZBTB45Q96K62 511 aaPredicted RBP5.14□□□□□ -1.59
SMC4-223ENST00000493695 MRGPRX1Q96LB2 322 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 NLRP4Q96MN2 994 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 ZPBPQ9BS86 351 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 MLXIPQ9HAP2 919 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 USP29Q9HBJ7 922 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 IP6K2Q9UHH9 426 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 PRSS44E7EML9 344 aa5.13□□□□□ -1.59
SMC4-223ENST00000493695 VCAM1P19320 739 aa5.13□□□□□ -1.59
SMC4-223ENST00000493695 SLC14A1Q13336 389 aa5.13□□□□□ -1.59
SMC4-223ENST00000493695 MTX1Q13505 466 aa5.13□□□□□ -1.59
SMC4-223ENST00000493695 PFKFB3Q16875 520 aaPredicted RBP5.13□□□□□ -1.59
SMC4-223ENST00000493695 MANEAQ5SRI9 462 aa5.13□□□□□ -1.59
SMC4-223ENST00000493695 TMEM240Q5SV17 173 aa5.13□□□□□ -1.59
SMC4-223ENST00000493695 DLK2Q6UY11 383 aa5.13□□□□□ -1.59
SMC4-223ENST00000493695 HPS3Q969F9 1004 aa5.13□□□□□ -1.59
SMC4-223ENST00000493695 AASDHPPTQ9NRN7 309 aa5.13□□□□□ -1.59
SMC4-223ENST00000493695 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.13□□□□□ -1.59
SMC4-223ENST00000493695 GTPBP1O00178 669 aaKnown RBP5.12□□□□□ -1.59
SMC4-223ENST00000493695 EXOC5O00471 708 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 PF4V1P10720 104 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 UQCRC1P31930 480 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 CFHR1Q03591 330 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 ZNF267Q14586 743 aaPredicted RBP5.12□□□□□ -1.59
SMC4-223ENST00000493695 UBAP2Q5T6F2 1119 aaKnown RBP5.12□□□□□ -1.59
SMC4-223ENST00000493695 DCAF12L1Q5VU92 463 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 DEF8Q6ZN54 512 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 MMP21Q8N119 569 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 SLC25A28Q96A46 364 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 C1GALT1C1Q96EU7 318 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 NT5C1BQ96P26 610 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 CTAGE1Q96RT6 745 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 PPP1R9BQ96SB3 815 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 VN1R3Q9BXE9 311 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 ARL8BQ9NVJ2 186 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.12□□□□□ -1.59
SMC4-223ENST00000493695 NOTCH4Q99466 2003 aa5.12□□□□□ -1.59
SMC4-223ENST00000493695 IGLV5-39A0A0G2JS06 123 aa5.11□□□□□ -1.59
SMC4-223ENST00000493695 SPRY2O43597 315 aa5.11□□□□□ -1.59
SMC4-223ENST00000493695 RASSF9O75901 435 aa5.11□□□□□ -1.59
SMC4-223ENST00000493695 TOMM40O96008 361 aa5.11□□□□□ -1.59
SMC4-223ENST00000493695 CD63P08962 238 aa5.11□□□□□ -1.59
SMC4-223ENST00000493695 NPR1P16066 1061 aa5.11□□□□□ -1.59
SMC4-223ENST00000493695 YY1P25490 414 aa5.11□□□□□ -1.59
SMC4-223ENST00000493695 INSCQ1MX18 579 aa5.11□□□□□ -1.59
SMC4-223ENST00000493695 B4GALNT4Q76KP1 1039 aa5.11□□□□□ -1.59
SMC4-223ENST00000493695 ZBTB8BQ8NAP8 495 aaPredicted RBP5.11□□□□□ -1.59
SMC4-223ENST00000493695 KBTBD7Q8WVZ9 684 aa5.11□□□□□ -1.59
SMC4-223ENST00000493695 TRIM54Q9BYV2 358 aa5.11□□□□□ -1.59
SMC4-223ENST00000493695 SLCO5A1Q9H2Y9 848 aa5.11□□□□□ -1.59
SMC4-223ENST00000493695 MRPL44Q9H9J2 332 aaKnown RBP5.11□□□□□ -1.59
SMC4-223ENST00000493695 CYSRT1A8MQ03 144 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 M0R3H8 397 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 FYB1O15117 783 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 INPPL1O15357 1258 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 MARCH6O60337 910 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 HGFP14210 728 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 HTR1BP28222 390 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 STK3Q13188 491 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 KPNB1Q14974 876 aaKnown RBP5.1□□□□□ -1.59
SMC4-223ENST00000493695 FAM110CQ1W6H9 321 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 PRTGQ2VWP7 1150 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 KRTAP27-1Q3LI81 207 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 KCTD20Q7Z5Y7 419 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 RBMXL3Q8N7X1 1067 aaKnown RBP5.1□□□□□ -1.59
SMC4-223ENST00000493695 C11orf44Q8N8P7 122 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 MPLKIPQ8TAP9 179 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 CHMP4CQ96CF2 233 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 LRGUKQ96M69 825 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 ICKQ9UPZ9 632 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 CDY1Q9Y6F8 540 aa5.1□□□□□ -1.59
SMC4-223ENST00000493695 TCF20Q9UGU0 1960 aaKnown RBP5.09□□□□□ -1.59
SMC4-223ENST00000493695 A0A088AWK7 358 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 IBSPP21815 317 aaPredicted RBP5.09□□□□□ -1.59
SMC4-223ENST00000493695 IL6STP40189 918 aaPredicted RBP5.09□□□□□ -1.59
SMC4-223ENST00000493695 PGDP52209 483 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 TIRAPP58753 221 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 HSF1Q00613 529 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 CFHR3Q02985 330 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 SRSF1Q07955 248 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMC4-223ENST00000493695 ATAT1Q5SQI0 421 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 ZDHHC24Q6UX98 284 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 Q6ZTC4 211 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 DENND1CQ8IV53 801 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 LINC01465Q8N7H1 131 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 FAM71DQ8N9W8 422 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 CTHRC1Q96CG8 243 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 VPS50Q96JG6 964 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 TXLNGQ9NUQ3 528 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 TYW1Q9NV66 732 aaKnown RBP5.09□□□□□ -1.59
SMC4-223ENST00000493695 TMEM45AQ9NWC5 275 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 NKX1-2Q9UD57 310 aaPredicted RBP5.09□□□□□ -1.59
SMC4-223ENST00000493695 HDAC9Q9UKV0 1011 aa5.09□□□□□ -1.59
SMC4-223ENST00000493695 ANKRD6Q9Y2G4 727 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms