RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ARL4CP56559 192 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 NR1H3Q13133 447 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 SKIDA1Q1XH10 827 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 ANKRD20A8PQ5CZ79 823 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 ZNF618Q5T7W0 954 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 SCYL2Q6P3W7 929 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 KLHDC9Q8NEP7 349 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 CCT8L2Q96SF2 557 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 B3GNT5Q9BYG0 378 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 CCDC134Q9H6E4 229 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 XPNPEP3Q9NQH7 507 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 DNAJC17Q9NVM6 304 aaKnown RBP11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 SAE1Q9UBE0 346 aaPredicted RBP11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 RSPH14Q9UHP6 348 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 E7EVH7 732 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 DAB1O75553 588 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 IL4RP24394 825 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 MATKP42679 507 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 GDF10P55107 478 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 MMRN1Q13201 1228 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 HIF1AQ16665 826 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 FOXR1Q6PIV2 292 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 FUKQ8N0W3 1084 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 PLD5Q8N7P1 536 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 GSTCDQ8NEC7 633 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 ZNF473Q8WTR7 871 aaKnown RBP11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 CPT1BQ92523 772 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 C9orf72Q96LT7 481 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 ZFP42Q96MM3 310 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 PWWP2AQ96N64 755 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 XPO6Q96QU8 1125 aaKnown RBP11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 FRMD8Q9BZ67 464 aaPredicted RBP11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 RNF19AQ9NV58 838 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 RCOR3Q9P2K3 495 aaPredicted RBP11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 FETUBQ9UGM5 382 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 ABT1Q9ULW3 272 aaKnown RBP11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 E7ESA3 106 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 HCRTO43612 131 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 LCP1P13796 627 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 TKTP29401 623 aaKnown RBP11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 MLH1P40692 756 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 BCAR1P56945 870 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 CACNB2Q08289 660 aaPredicted RBP11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 DARS2Q6PI48 645 aaKnown RBP11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 PPP1R21Q6ZMI0 780 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 PIGZQ86VD9 579 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 EXOC3L1Q86VI1 746 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 UNC45BQ8IWX7 931 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 PCSK9Q8NBP7 692 aaKnown RBP11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 ARHGEF2Q92974 986 aaKnown RBP11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 SENP8Q96LD8 212 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 SELENOSQ9BQE4 189 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 ARHGAP39Q9C0H5 1083 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 SQORQ9Y6N5 450 aa11.25□□□□□ -0.61
PHACTR4-204ENST00000493669 BCLAF3A2AJT9 711 aaKnown RBP11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 CABYRO75952 493 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 FBXO21O94952 628 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 SKIP12755 728 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 CHN1P15882 459 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 XRCC4Q13426 336 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 WSCD1Q658N2 575 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 MICALCLQ6ZW33 695 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 REM2Q8IYK8 340 aaPredicted RBP11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 PQLC3Q8N755 202 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 WNT8BQ93098 351 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 GAD1Q99259 594 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 LPIN3Q9BQK8 851 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 UBN1Q9NPG3 1134 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 EURLQ9NYK6 297 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 PAK5Q9P286 719 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 SRCAPQ6ZRS2 3230 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 C5orf60A6NFR6 353 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 ASGR1P07306 291 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 NR2C2P49116 596 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 PRKCZQ05513 592 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 PTK7Q13308 1070 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 SLC25A52Q3SY17 297 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 RAB6CQ53S08 254 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 CCSAPQ6IQ19 270 aaPredicted RBP11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 CDKL3Q8IVW4 592 aaPredicted RBP11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 FAM71DQ8N9W8 422 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 PCDH19Q8TAB3 1148 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 RAB6CQ9H0N0 254 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 PPANQ9NQ55 473 aaKnown RBP11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 PTCH2Q9Y6C5 1203 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 ARL5CA6NH57 179 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 H7C0C1 242 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 CTSHP09668 335 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 FAM200BP0CF97 657 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 L1CAMP32004 1257 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 PHBP35232 272 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 ATP5OP48047 213 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 MRPS5P82675 430 aaKnown RBP11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 ZC3H12AQ5D1E8 599 aaKnown RBP11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 FAM26DQ5JW98 314 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 SRLQ86TD4 932 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 ATP11CQ8NB49 1132 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 CLEC4CQ8WTT0 213 aa11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 ATXN2LQ8WWM7 1075 aaKnown RBP11.24□□□□□ -0.61
PHACTR4-204ENST00000493669 NRDE2Q9H7Z3 1164 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms