RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 SMOQ99835 787 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 TPSD1Q9BZJ3 242 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 CSNK1G1Q9HCP0 422 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 ARHGEF4Q9NR80 690 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 TLR8Q9NR97 1041 aaKnown RBP17.59■□□□□ 0.41
PTPRU-208ENST00000493601 FAM49BQ9NUQ9 324 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 RHOBTB3O94955 611 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 KLF8O95600 359 aaPredicted RBP17.58■□□□□ 0.4
PTPRU-208ENST00000493601 FAM200BP0CF97 657 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 NR2F2P24468 414 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 SLC6A11P48066 632 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 MAP3K7CLP57077 242 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 CREB5Q02930 508 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 GAD2Q05329 585 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 INCA1Q0VD86 236 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 STPG1Q5TH74 334 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 PMS2CLQ68D20 193 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 SPOPLQ6IQ16 392 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 INTS8Q75QN2 995 aaKnown RBP17.58■□□□□ 0.4
PTPRU-208ENST00000493601 ALLCQ8N6M5 410 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 IL17RCQ8NAC3 791 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 ZMIZ2Q8NF64 920 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 MDGA1Q8NFP4 955 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 DNAI2Q9GZS0 605 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 SMOC1Q9H4F8 434 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 RXFP3Q9NSD7 469 aa17.58■□□□□ 0.4
PTPRU-208ENST00000493601 THADAQ6YHU6 1953 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 ACACBO00763 2458 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 A0A0A0MRY4 1105 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 FAM237AA0A1B0GTK4 181 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 BCLAF3A2AJT9 711 aaKnown RBP17.57■□□□□ 0.4
PTPRU-208ENST00000493601 HOXC11O43248 304 aaPredicted RBP17.57■□□□□ 0.4
PTPRU-208ENST00000493601 TLR5O60602 858 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 BEST1O76090 585 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 CAVIN2O95810 425 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 KRT13P13646 458 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 KCNA4P22459 653 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 TIE1P35590 1138 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 TNFRSF4P43489 277 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 NDUFA8P51970 172 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 ENPEPQ07075 957 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 GOLGA8FQ08AF8 430 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 GOLGA8DPQ0D2H9 430 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 MESP2Q0VG99 397 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 EOGTQ5NDL2 527 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 C1orf220Q5T0J3 134 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 TTC30AQ86WT1 665 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 SFTPA1Q8IWL2 248 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 BBS7Q8IWZ6 715 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 C12orf29Q8N999 325 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 TXNDC5Q8NBS9 432 aaKnown RBP17.57■□□□□ 0.4
PTPRU-208ENST00000493601 CNTNAP3BQ96NU0 1288 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 CNTNAP3Q9BZ76 1288 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 CYP3A43Q9HB55 503 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 SPHK2Q9NRA0 654 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 ATP6V1DQ9Y5K8 247 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 PLXND1Q9Y4D7 1925 aa17.57■□□□□ 0.4
PTPRU-208ENST00000493601 PRR29P0C7W0 189 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 IRF1P10914 325 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 CHRM1P11229 460 aaPredicted RBP17.56■□□□□ 0.4
PTPRU-208ENST00000493601 RPL13P26373 211 aaKnown RBP17.56■□□□□ 0.4
PTPRU-208ENST00000493601 ADORA2BP29275 332 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 KIR2DL1P43626 348 aaPredicted RBP17.56■□□□□ 0.4
PTPRU-208ENST00000493601 DPYDQ12882 1025 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 RNF43Q68DV7 783 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 TCEAL6Q6IPX3 200 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 NUDT18Q6ZVK8 323 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 TRMT11Q7Z4G4 463 aaKnown RBP17.56■□□□□ 0.4
PTPRU-208ENST00000493601 ETFBKMTQ8IXQ9 262 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 FAM186BQ8IYM0 893 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 PHTF2Q8N3S3 785 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 CCDC150Q8NCX0 1101 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 WHAMMQ8TF30 809 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 TCEAL3Q969E4 200 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 SPACA7Q96KW9 195 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 HNRNPABQ99729 332 aaKnown RBP17.56■□□□□ 0.4
PTPRU-208ENST00000493601 NT5C1AQ9BXI3 368 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 NIF3L1Q9GZT8 377 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 SCAND2PQ9GZW5 306 aaPredicted RBP17.56■□□□□ 0.4
PTPRU-208ENST00000493601 PNPLA8Q9NP80 782 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 POLMQ9NP87 494 aaPredicted RBP17.56■□□□□ 0.4
PTPRU-208ENST00000493601 DEC1Q9P2X7 70 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 SCML2Q9UQR0 700 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 INVSQ9Y283 1065 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 PCDHA5Q9Y5H7 936 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 EPG5Q9HCE0 2579 aa17.56■□□□□ 0.4
PTPRU-208ENST00000493601 ANTXRLA6NF34 631 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 SGK1O00141 431 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 TRIM49P0CI25 452 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 TRIM49CP0CI26 452 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 PSMC2P35998 433 aaKnown RBP17.55■□□□□ 0.4
PTPRU-208ENST00000493601 GCLMP48507 274 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 ANO4Q32M45 955 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 TMEM92Q6UXU6 159 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 CLEC20AQ6ZU45 233 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 CYP2U1Q7Z449 544 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 GUF1Q8N442 669 aaKnown RBP17.55■□□□□ 0.4
PTPRU-208ENST00000493601 OLIG1Q8TAK6 271 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 KCNV2Q8TDN2 545 aa17.55■□□□□ 0.4
PTPRU-208ENST00000493601 EDEM2Q9BV94 578 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms