RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 FRMD7Q6ZUT3 714 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 FBXW8Q8N3Y1 598 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 RAB3IL1Q8TBN0 382 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 GRIN3AQ8TCU5 1115 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 MKL1Q969V6 931 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 TRIM11Q96F44 468 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 UGT1A7Q9HAW7 530 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 UGT1A10Q9HAW8 530 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 UGT1A8Q9HAW9 530 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 TMEM8AQ9HCN3 771 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 MRPL47Q9HD33 250 aaKnown RBP12.15□□□□□ -0.46
HDAC4-210ENST00000493582 RSL24D1Q9UHA3 163 aaKnown RBP12.15□□□□□ -0.46
HDAC4-210ENST00000493582 PCDHB2Q9Y5E7 798 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 SH3PXD2BA1X283 911 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 RGL2O15211 777 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 TBC1D12O60347 775 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 FOSP01100 380 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 TM4SF1P30408 202 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 HOXD12P35452 270 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 APOFQ13790 326 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 TFDP3Q5H9I0 405 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 SLFN13Q68D06 897 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 LMBRD2Q68DH5 695 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 POTEHQ6S545 545 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 POLNQ7Z5Q5 900 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 FBXO11Q86XK2 927 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 UNC45BQ8IWX7 931 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 ZFPM1Q8IX07 1006 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 SLC15A3Q8IY34 581 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 SLC35B2Q8TB61 432 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 FEZF2Q8TBJ5 459 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 RSAD2Q8WXG1 361 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 CFAP36Q96G28 342 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 ABHD8Q96I13 439 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 ZNF778Q96MU6 729 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 UNC45AQ9H3U1 944 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 IFT122Q9HBG6 1241 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 PKD2L1Q9P0L9 805 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 APOBEC2Q9Y235 224 aaKnown RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 COQ4Q9Y3A0 265 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 ROBO1Q9Y6N7 1651 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 XPO1O14980 1071 aaKnown RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 SNNO75324 88 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 NCF2P19878 526 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 ATXN3P54252 364 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 VWA5B1Q5TIE3 1220 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 ERI1Q8IV48 349 aaKnown RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 CCDC33Q8N5R6 958 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 FAM71DQ8N9W8 422 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 PPP1R14CQ8TAE6 165 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 TFB1MQ8WVM0 346 aaKnown RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 LRGUKQ96M69 825 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 ZNF512Q96ME7 567 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 XAB2Q9HCS7 855 aaKnown RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 GPRC5CQ9NQ84 441 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 PLK2Q9NYY3 685 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 SRP68Q9UHB9 627 aaKnown RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 DNAJC16Q9Y2G8 782 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 KANSL1LA0AUZ9 987 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 TMEM150BA6NC51 233 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 TMEM247A6NEH6 219 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 ADCY6O43306 1168 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 CD1EP15812 388 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 ZFXP17010 805 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 CDKN2BP42772 138 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 WASHC5Q12768 1159 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 TTC39BQ5VTQ0 682 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 PLEKHA7Q6IQ23 1121 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 TRIML2Q8N7C3 387 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 DDI1Q8WTU0 396 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 GFM2Q969S9 779 aaKnown RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 COPS7BQ9H9Q2 264 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-210ENST00000493582 CD209Q9NNX6 404 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 TBCCD1Q9NVR7 557 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 RAB26Q9ULW5 256 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 PSMD13Q9UNM6 376 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 SSX2IPQ9Y2D8 614 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 HEY1Q9Y5J3 304 aa12.14□□□□□ -0.47
HDAC4-210ENST00000493582 PMM2O15305 246 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 E2F6O75461 281 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 RFPL1O75677 317 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 FBXO21O94952 628 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 PEX3P56589 373 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 MRPS22P82650 360 aaKnown RBP12.13□□□□□ -0.47
HDAC4-210ENST00000493582 ZNF252P-AS1Q0IIN9 211 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 PSMD6Q15008 389 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 SMTNL2Q2TAL5 461 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 PPP6R3Q5H9R7 873 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-210ENST00000493582 ITPRIPL1Q6GPH6 555 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 SPOPLQ6IQ16 392 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 ELMSAN1Q6PJG2 1045 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 PACS1Q6VY07 963 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 BRINP3Q76B58 766 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 SLC26A11Q86WA9 606 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 WDR75Q8IWA0 830 aaKnown RBP12.13□□□□□ -0.47
HDAC4-210ENST00000493582 PHTF2Q8N3S3 785 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 RSPH1Q8WYR4 309 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 TRIM56Q9BRZ2 755 aaKnown RBP12.13□□□□□ -0.47
HDAC4-210ENST00000493582 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
HDAC4-210ENST00000493582 H0YIN7 160 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms