RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 PACSIN1Q9BY11 444 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 LRRC3Q9BY71 257 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 S1PR5Q9H228 398 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 NMUR1Q9HB89 426 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 IL21Q9HBE4 155 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 CYLDQ9NQC7 956 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 CNGB3Q9NQW8 809 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 TLR8Q9NR97 1041 aaKnown RBP16.54■□□□□ 0.24
HPS4-216ENST00000493455 METTL5Q9NRN9 209 aaKnown RBP16.54■□□□□ 0.24
HPS4-216ENST00000493455 COMMD8Q9NX08 183 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 NUDT5Q9UKK9 219 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 SCML2Q9UQR0 700 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 USP15Q9Y4E8 981 aaPredicted RBP16.54■□□□□ 0.24
HPS4-216ENST00000493455 USP3Q9Y6I4 520 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 SZT2Q5T011 3432 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 NRG2O14511 850 aaPredicted RBP16.53■□□□□ 0.24
HPS4-216ENST00000493455 TADA3O75528 432 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 GZMAP12544 262 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 RRM1P23921 792 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 MTHFRP42898 656 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 PGFP49763 221 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 TAF5Q15542 800 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 ARHGAP15Q53QZ3 475 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 STXBP5Q5T5C0 1151 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 PPP1R2P3Q6NXS1 205 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 DNAJC24Q6P3W2 148 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 TOGARAM2Q6ZUX3 1019 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 CCDC170Q8IYT3 715 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 SMRP1Q8NCR6 262 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 ACRBPQ8NEB7 543 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 CCDC112Q8NEF3 446 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 PDZD8Q8NEN9 1154 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 ITFG1Q8TB96 612 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 MYRFLQ96LU7 910 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 SELENOOQ9BVL4 669 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 NACA2Q9H009 215 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 CNOT8Q9UFF9 292 aaKnown RBP16.53■□□□□ 0.24
HPS4-216ENST00000493455 STRIP2Q9ULQ0 834 aa16.53■□□□□ 0.24
HPS4-216ENST00000493455 EPN1Q9Y6I3 576 aaPredicted RBP16.53■□□□□ 0.24
HPS4-216ENST00000493455 DENND4AQ7Z401 1863 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.52■□□□□ 0.24
HPS4-216ENST00000493455 C2orf78A6NCI8 922 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 GRXCR2A6NFK2 248 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 ZNF197O14709 1029 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 CAPN9O14815 690 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 ZNF263O14978 683 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 SART1O43290 800 aaKnown RBP16.52■□□□□ 0.24
HPS4-216ENST00000493455 NDUFA10O95299 355 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 FGF19O95750 216 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 LTFP02788 710 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 F11P03951 625 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 POU2F2P09086 479 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 FECHP22830 423 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 GBP2P32456 591 aaPredicted RBP16.52■□□□□ 0.24
HPS4-216ENST00000493455 GABRB2P47870 512 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 RPL34P49207 117 aaKnown RBP16.52■□□□□ 0.24
HPS4-216ENST00000493455 GALCP54803 685 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 SLC6A3Q01959 620 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 TFF2Q03403 129 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
HPS4-216ENST00000493455 PTP4A2Q12974 167 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 GPR158Q5T848 1215 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 TXNDC8Q6A555 127 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 RSRC2Q7L4I2 434 aaKnown RBP16.52■□□□□ 0.24
HPS4-216ENST00000493455 SCD5Q86SK9 330 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 TMEM150AQ86TG1 271 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 MAB21L3Q8N8X9 362 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 LEMD2Q8NC56 503 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 MCRS1Q96EZ8 462 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 THAP2Q9H0W7 228 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 POMKQ9H5K3 350 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 CCSER2Q9H7U1 834 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 OSER1Q9NX31 292 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 IL37Q9NZH6 218 aa16.52■□□□□ 0.24
HPS4-216ENST00000493455 MDM4O15151 490 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 MBTPS2O43462 519 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 H2AFZP0C0S5 128 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 RALAP11233 206 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 RARGP13631 454 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 MAGEA1P43355 309 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 CCZ1BP86790 482 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 CCZ1P86791 482 aaPredicted RBP16.51■□□□□ 0.23
HPS4-216ENST00000493455 SMAD4Q13485 552 aaKnown RBP16.51■□□□□ 0.23
HPS4-216ENST00000493455 ZNF268Q14587 947 aaPredicted RBP16.51■□□□□ 0.23
HPS4-216ENST00000493455 CBX2Q14781 532 aaPredicted RBP16.51■□□□□ 0.23
HPS4-216ENST00000493455 EFHC1Q5JVL4 640 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 PRSS36Q5K4E3 855 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 C10orf120Q5SQS8 335 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 BSPRYQ5W0U4 402 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 PM20D1Q6GTS8 502 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 OLFML1Q6UWY5 402 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 H2AFVQ71UI9 128 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 BHLHA9Q7RTU4 235 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 MON1AQ86VX9 555 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 ARHGAP18Q8N392 663 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 ST13P5Q8NFI4 369 aaPredicted RBP16.51■□□□□ 0.23
HPS4-216ENST00000493455 RNF139Q8WU17 664 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 CTNNBL1Q8WYA6 563 aaPredicted RBP16.51■□□□□ 0.23
HPS4-216ENST00000493455 OVCA2Q8WZ82 227 aa16.51■□□□□ 0.23
HPS4-216ENST00000493455 IRGQQ8WZA9 623 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms