RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 XYLT1Q86Y38 959 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 TMC8Q8IU68 726 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 SCUBE3Q8IX30 993 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 ZNF276Q8N554 614 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 MRPS31Q92665 395 aaKnown RBP12.13□□□□□ -0.47
LSM2-214ENST00000493387 HLA-CQ95604 372 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 MCRS1Q96EZ8 462 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 LRRC3Q9BY71 257 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 UBE2ZQ9H832 354 aaPredicted RBP12.13□□□□□ -0.47
LSM2-214ENST00000493387 MRPL47Q9HD33 250 aaKnown RBP12.13□□□□□ -0.47
LSM2-214ENST00000493387 WDR6Q9NNW5 1121 aaKnown RBP12.13□□□□□ -0.47
LSM2-214ENST00000493387 SPTLC3Q9NUV7 552 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 PARVAQ9NVD7 372 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 TMEM51Q9NW97 253 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 CLIC5Q9NZA1 410 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 ZNF840PA6NDX5 716 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 PIK3R2O00459 728 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 HSF2BPO75031 334 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 LTFP02788 710 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 TMEM253P0C7T8 217 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 GABRR2P28476 465 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 TUBP50607 506 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 GALCP54803 685 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 YWHAGP61981 247 aaKnown RBP eCLIP12.12□□□□□ -0.47
LSM2-214ENST00000493387 DLX2Q07687 328 aaPredicted RBP12.12□□□□□ -0.47
LSM2-214ENST00000493387 PUS10Q3MIT2 529 aaKnown RBP12.12□□□□□ -0.47
LSM2-214ENST00000493387 BTBD8Q5XKL5 378 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 DNAJC24Q6P3W2 148 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 OLFML1Q6UWY5 402 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 RAD9BQ6WBX8 426 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 FAM183BPQ6ZVS7 135 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 HS6ST3Q8IZP7 471 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 SMRP1Q8NCR6 262 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 C3orf20Q8ND61 904 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 MAFAQ8NHW3 353 aaPredicted RBP12.12□□□□□ -0.47
LSM2-214ENST00000493387 PPM1EQ8WY54 764 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 CTNNBL1Q8WYA6 563 aaPredicted RBP12.12□□□□□ -0.47
LSM2-214ENST00000493387 ZNF653Q96CK0 615 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 SELENOOQ9BVL4 669 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 ATXN3LQ9H3M9 355 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 IL21Q9HBE4 155 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 ZNF334Q9HCZ1 680 aaPredicted RBP12.12□□□□□ -0.47
LSM2-214ENST00000493387 ABCC13Q9NSE7 274 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 OLA1Q9NTK5 396 aaKnown RBP12.12□□□□□ -0.47
LSM2-214ENST00000493387 GMIPQ9P107 970 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 CHORDC1Q9UHD1 332 aaPredicted RBP12.12□□□□□ -0.47
LSM2-214ENST00000493387 MRPS23Q9Y3D9 190 aaKnown RBP12.12□□□□□ -0.47
LSM2-214ENST00000493387 PCDHA13Q9Y5I0 950 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 SCINQ9Y6U3 715 aa12.12□□□□□ -0.47
LSM2-214ENST00000493387 SIGLEC16A6NMB1 481 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 CYP1A2P05177 515 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 KRT3P12035 628 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 DESP17661 470 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 KCNA5P22460 613 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 FSHRP23945 695 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 YWHAZP63104 245 aaKnown RBP12.11□□□□□ -0.47
LSM2-214ENST00000493387 CCZ1BP86790 482 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 CCZ1P86791 482 aaPredicted RBP12.11□□□□□ -0.47
LSM2-214ENST00000493387 SMAD4Q13485 552 aaKnown RBP12.11□□□□□ -0.47
LSM2-214ENST00000493387 HECTD3Q5T447 861 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 FAM102AQ5T9C2 384 aaPredicted RBP12.11□□□□□ -0.47
LSM2-214ENST00000493387 BSPRYQ5W0U4 402 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 PLEKHA7Q6IQ23 1121 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 KLHDC10Q6PID8 442 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 POTEHQ6S545 545 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 GAREM2Q75VX8 874 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 SCD5Q86SK9 330 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 RNF139Q8WU17 664 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 FAM149B1Q96BN6 582 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 CALR3Q96L12 384 aaKnown RBP12.11□□□□□ -0.47
LSM2-214ENST00000493387 POPDC2Q9HBU9 364 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 HCFC1R1Q9NWW0 138 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 RRN3Q9NYV6 651 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 TJP2Q9UDY2 1190 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 CNOT8Q9UFF9 292 aaKnown RBP12.11□□□□□ -0.47
LSM2-214ENST00000493387 LCMT1Q9UIC8 334 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 FAM50BQ9Y247 325 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 PATJQ8NI35 1801 aa12.11□□□□□ -0.47
LSM2-214ENST00000493387 CHD9Q3L8U1 2897 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 A0A1W2PQH9 124 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 YJEFN3A6XGL0 299 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 E7ENQ6 273 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 GOLGA8SH3BPF8 625 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 CAPN9O14815 690 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 ZNF263O14978 683 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 ABL1P00519 1130 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 ABCB4P21439 1286 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 RRM1P23921 792 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 MAMLD1Q13495 774 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 MTF1Q14872 753 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 LEXMQ3ZCV2 418 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 PRSS36Q5K4E3 855 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 DCUN1D2Q6PH85 259 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 RSRC2Q7L4I2 434 aaKnown RBP12.1□□□□□ -0.47
LSM2-214ENST00000493387 BHLHA9Q7RTU4 235 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 KIAA1328Q86T90 577 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 TMEM150AQ86TG1 271 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 RHOT2Q8IXI1 618 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 SHKBP1Q8TBC3 707 aa12.1□□□□□ -0.47
LSM2-214ENST00000493387 SUSD6Q92537 303 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms