RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 GGCXP38435 758 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 MATKP42679 507 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 OR1G1P47890 313 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 TKTL1P51854 596 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 DAOAP59103 153 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 OTUD4Q01804 1114 aaKnown RBP9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 CAV1Q03135 178 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 YWHAHQ04917 246 aaPredicted RBP9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 TFDP2Q14188 446 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 DPYSL3Q14195 570 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 OASLQ15646 514 aaKnown RBP9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 RAB6CQ53S08 254 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 FAM171BQ6P995 826 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 LRIG3Q6UXM1 1119 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 GSTA5Q7RTV2 222 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 ZNF280BQ86YH2 543 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 COLGALT2Q8IYK4 626 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 DEFB106AQ8N104 65 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 ALLCQ8N6M5 410 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 CCDC89Q8N998 374 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 ZMIZ2Q8NF64 920 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 DBF4BQ8NFT6 615 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 OR10T2Q8NGX3 314 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 SLC35B2Q8TB61 432 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 FBXO25Q8TCJ0 367 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 UBLCP1Q8WVY7 318 aaPredicted RBP9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 CENPIQ92674 756 aaPredicted RBP9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 ART4Q93070 314 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 NKD2Q969F2 451 aaPredicted RBP9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 ZIM3Q96PE6 472 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 PKMYT1Q99640 499 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 C11orf84Q9BUA3 381 aaPredicted RBP9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 MAK16Q9BXY0 300 aaKnown RBP9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 ULBP1Q9BZM6 244 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 RAB6CQ9H0N0 254 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 CNGB3Q9NQW8 809 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 GPATCH2LQ9NWQ4 482 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 LRFN2Q9ULH4 789 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 STAP1Q9ULZ2 295 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 ZNF148Q9UQR1 794 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 DRG1Q9Y295 367 aaKnown RBP9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 NEU2Q9Y3R4 380 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 PCDHB7Q9Y5E2 793 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 ZNF487B1APH4 448 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 GOLGA8KD6RF30 607 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 F8W810 466 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 APOC4-APOC2K7ER74 178 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 ENPP3O14638 875 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 NDC80O14777 642 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 APOL1O14791 398 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 MCF2LO15068 1137 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 POLR3GO15318 223 aaPredicted RBP9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 TRAPPC3O43617 180 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 RNF40O75150 1001 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 SYF2O95926 243 aaKnown RBP9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 APOC2P02655 101 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 ITGAVP06756 1048 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 ITIH2P19823 946 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 TGM2P21980 687 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 NOS2P35228 1153 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 RDXP35241 583 aaKnown RBP9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 ADCY8P40145 1251 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 VPS41P49754 854 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 ATN1P54259 1190 aaPredicted RBP9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 CACNA2D1P54289 1103 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 YWHAZP63104 245 aaKnown RBP9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 GABPB1Q06547 395 aaPredicted RBP9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 DHX9Q08211 1270 aaKnown RBP9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 MMRN1Q13201 1228 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 GPNMBQ14956 572 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 TRIP13Q15645 432 aaPredicted RBP9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 UAP1Q16222 522 aaPredicted RBP9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 SLC25A52Q3SY17 297 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 RAB41Q5JT25 222 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 IZUMO3Q5VZ72 239 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 C4orf50Q6ZRC1 276 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 ANKRD33Q7Z3H0 272 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 IQCKQ8N0W5 287 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 ACTL9Q8TC94 416 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 PIK3R5Q8WYR1 880 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 IRGQQ8WZA9 623 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 SLC2A13Q96QE2 648 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 SH3GL2Q99962 352 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 ZNF670Q9BS34 389 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 TXLNGYQ9BZA5 131 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 HIPK3Q9H422 1215 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 POPDC2Q9HBU9 364 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 PCDH9Q9HC56 1237 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 PCDH18Q9HCL0 1135 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 CSNK1G1Q9HCP0 422 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 PNPLA8Q9NP80 782 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 DMAP1Q9NPF5 467 aaPredicted RBP9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 AP4E1Q9UPM8 1137 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 PLAAQ9Y263 795 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 FAN1Q9Y2M0 1017 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 PRG3Q9Y2Y8 225 aaPredicted RBP9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 HTTP42858 3142 aa9.54□□□□□ -0.88
SMARCC1-208ENST00000492896 GREB1Q4ZG55 1949 aa9.53□□□□□ -0.88
SMARCC1-208ENST00000492896 DCDC2CA8MYV0 355 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms