RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 GPRIN1Q7Z2K8 1008 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 C12orf40Q86WS4 652 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 CCDC33Q8N5R6 958 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 KIAA1958Q8N8K9 716 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 CCDC150Q8NCX0 1101 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 USP33Q8TEY7 942 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 WBP2Q969T9 261 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 CYFIP2Q96F07 1278 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 NT5C1AQ9BXI3 368 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 NIF3L1Q9GZT8 377 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 ARRDC1-AS1Q9H2J1 176 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 TMEM8AQ9HCN3 771 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 CSNK1G1Q9HCP0 422 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 TBC1D14Q9P2M4 693 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 SH3BP1Q9Y3L3 701 aa18.25■□□□□ 0.51
SGMS1-204ENST00000492601 TPRP12270 2363 aaKnown RBP18.24■□□□□ 0.51
SGMS1-204ENST00000492601 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.24■□□□□ 0.51
SGMS1-204ENST00000492601 E2F8A0AVK6 867 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 DCDC2BA2VCK2 349 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 DCLK1O15075 740 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 ADH5P11766 374 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 PI4KAP42356 2102 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 TUBP50607 506 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 LY6G5CQ5SRR4 150 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 CCDC26Q8TAB7 109 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 WHAMMQ8TF30 809 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 CCDC34Q96HJ3 373 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 PNKPQ96T60 521 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 HNRNPABQ99729 332 aaKnown RBP18.24■□□□□ 0.51
SGMS1-204ENST00000492601 FBXO44Q9H4M3 255 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 CYP3A43Q9HB55 503 aa18.24■□□□□ 0.51
SGMS1-204ENST00000492601 GOLGA6L4A6NEF3 574 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 CYP26A1O43174 497 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 GDF9O60383 454 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 TLR5O60602 858 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 CILPO75339 1184 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 KAT7O95251 611 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 TBX18O95935 607 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 DGKEP52429 567 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 EDRF1Q3B7T1 1238 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 ZNF394Q53GI3 561 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 KRT39Q6A163 491 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 BBS7Q8IWZ6 715 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 FMR1NBQ8N0W7 255 aaPredicted RBP18.23■□□□□ 0.51
SGMS1-204ENST00000492601 TSTD1Q8NFU3 115 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 SEMA4DQ92854 862 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 ERCC4Q92889 916 aaPredicted RBP18.23■□□□□ 0.51
SGMS1-204ENST00000492601 RTKNQ9BST9 563 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 TLR8Q9NR97 1041 aaKnown RBP18.23■□□□□ 0.51
SGMS1-204ENST00000492601 INVSQ9Y283 1065 aa18.23■□□□□ 0.51
SGMS1-204ENST00000492601 HHLA1C9JL84 531 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 CETN3O15182 167 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 EPN2O95208 641 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 APODP05090 189 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 EPB41P11171 864 aaKnown RBP18.22■□□□□ 0.51
SGMS1-204ENST00000492601 ACO1P21399 889 aaKnown RBP18.22■□□□□ 0.51
SGMS1-204ENST00000492601 PRCPP42785 496 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 ENPEPQ07075 957 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 PLK5Q496M5 336 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 EMC10Q5UCC4 262 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 TTC30AQ86WT1 665 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 ALLCQ8N6M5 410 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 NAT16Q8N8M0 369 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 NETO1Q8TDF5 533 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 OTUB2Q96DC9 234 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 LOXL4Q96JB6 756 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 TPSD1Q9BZJ3 242 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 SMOC1Q9H4F8 434 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 ZDHHC4Q9NPG8 344 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 ARHGEF4Q9NR80 690 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 OSER1Q9NX31 292 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 EBF1Q9UH73 591 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 MMP17Q9ULZ9 603 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 SCML2Q9UQR0 700 aa18.22■□□□□ 0.51
SGMS1-204ENST00000492601 KLF8O95600 359 aaPredicted RBP18.21■□□□□ 0.51
SGMS1-204ENST00000492601 GTF2H1P32780 548 aa18.21■□□□□ 0.51
SGMS1-204ENST00000492601 TIE1P35590 1138 aa18.21■□□□□ 0.51
SGMS1-204ENST00000492601 EIF2DP41214 584 aaKnown RBP18.21■□□□□ 0.51
SGMS1-204ENST00000492601 MXI1P50539 228 aa18.21■□□□□ 0.51
SGMS1-204ENST00000492601 MRPS21P82921 87 aaKnown RBP18.21■□□□□ 0.51
SGMS1-204ENST00000492601 GAD2Q05329 585 aa18.21■□□□□ 0.51
SGMS1-204ENST00000492601 BECN1Q14457 450 aa18.21■□□□□ 0.51
SGMS1-204ENST00000492601 SF3A2Q15428 464 aaKnown RBP18.21■□□□□ 0.51
SGMS1-204ENST00000492601 ANO4Q32M45 955 aa18.21■□□□□ 0.51
SGMS1-204ENST00000492601 PPP1R26Q5T8A7 1209 aaPredicted RBP18.21■□□□□ 0.51
SGMS1-204ENST00000492601 ANO7Q6IWH7 933 aa18.21■□□□□ 0.51
SGMS1-204ENST00000492601 FBXL13Q8NEE6 735 aa18.21■□□□□ 0.51
SGMS1-204ENST00000492601 ZC3H10Q96K80 434 aaKnown RBP18.21■□□□□ 0.51
SGMS1-204ENST00000492601 HEXIM2Q96MH2 286 aaKnown RBP18.21■□□□□ 0.51
SGMS1-204ENST00000492601 DUSP15Q9H1R2 295 aaPredicted RBP18.21■□□□□ 0.51
SGMS1-204ENST00000492601 RMND1Q9NWS8 449 aa18.21■□□□□ 0.51
SGMS1-204ENST00000492601 NUDT5Q9UKK9 219 aa18.21■□□□□ 0.51
SGMS1-204ENST00000492601 PLXND1Q9Y4D7 1925 aa18.21■□□□□ 0.51
SGMS1-204ENST00000492601 A0A1W2PQH9 124 aa18.2■□□□□ 0.5
SGMS1-204ENST00000492601 MDM4O15151 490 aa18.2■□□□□ 0.5
SGMS1-204ENST00000492601 HNRNPLP14866 589 aaKnown RBP eCLIP18.2■□□□□ 0.5
SGMS1-204ENST00000492601 GBP1P32455 592 aa18.2■□□□□ 0.5
SGMS1-204ENST00000492601 ATP5C1P36542 298 aaKnown RBP18.2■□□□□ 0.5
SGMS1-204ENST00000492601 GRIA2P42262 883 aa18.2■□□□□ 0.5
SGMS1-204ENST00000492601 CRY1Q16526 586 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms