RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 CFAP221Q4G0U5 840 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 DAB2IPQ5VWQ8 1189 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 TRIM68Q6AZZ1 485 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 ACAD10Q6JQN1 1059 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 C16orf59Q7L2K0 433 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 TFAP2DQ7Z6R9 452 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 TADA2BQ86TJ2 420 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 C12orf56Q8IXR9 622 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 CARNMT1Q8N4J0 409 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 RFFLQ8WZ73 363 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 N4BP2L2Q92802 583 aaPredicted RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 ARHGEF2Q92974 986 aaKnown RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 IGSF21Q96ID5 467 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 TMEM209Q96SK2 561 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 FIZ1Q96SL8 496 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 NCAPGQ9BPX3 1015 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 TLR9Q9NR96 1032 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 DMAC2Q9NW81 257 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 NKIRAS1Q9NYS0 192 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 IP6K2Q9UHH9 426 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 SFMBT1Q9UHJ3 866 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 KIAA1257Q9ULG3 409 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 TPX2Q9ULW0 747 aaKnown RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 MORC2Q9Y6X9 1032 aaPredicted RBP4.68□□□□□ -1.66
TRA2B-215ENST00000492417 MYH11P35749 1972 aa4.68□□□□□ -1.66
TRA2B-215ENST00000492417 LAMB1P07942 1786 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 GTPBP10A4D1E9 387 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 FAM47DPA6NHR8 397 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 PTGESO14684 152 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 NOL3O60936 208 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 ZBED1O96006 694 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 FGGP02679 453 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 ADCY8P40145 1251 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 PBX2P40425 430 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 GPR15P49685 360 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 ATP1A2P50993 1020 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 KPNA1P52294 538 aaPredicted RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 YWHAZP63104 245 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 AP1B1Q10567 949 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 MTM1Q13496 603 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 CDH18Q13634 790 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 PDE1CQ14123 709 aaPredicted RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 MAP7Q14244 749 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 MBTPS1Q14703 1052 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 C15orf59Q2T9L4 293 aaPredicted RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 PPP1R2P3Q6NXS1 205 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 IFT20Q8IY31 132 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 BBS5Q8N3I7 341 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 GBP7Q8N8V2 638 aaPredicted RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 SCAMP5Q8TAC9 235 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 UHMK1Q8TAS1 419 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 FEZF2Q8TBJ5 459 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 FAM172AQ8WUF8 416 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 SLC22A17Q8WUG5 538 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 TRIM4Q9C037 500 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 DNAJC17Q9NVM6 304 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 WDR35Q9P2L0 1181 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 MOSPD1Q9UJG1 213 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 HPCAL4Q9UM19 191 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 SLC8A2Q9UPR5 921 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 STK38LQ9Y2H1 464 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 PCDHGC5Q9Y5F6 944 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 ZMYM2Q9UBW7 1377 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 OR6C75A6NL08 312 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 RNF225M0QZC1 329 aaPredicted RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 MCF2LO15068 1137 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 RFPL2O75678 378 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 GAS8O95995 478 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 ARL1P40616 181 aaPredicted RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 BASP1P80723 227 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 CYP4F8P98187 520 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 INTS6LQ5JSJ4 861 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 UBXN11Q5T124 520 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 GPR158Q5T848 1215 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 RTN4RL1Q86UN2 441 aaPredicted RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 UNC93AQ86WB7 457 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 TOP6BLQ8N6T0 577 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 NAT16Q8N8M0 369 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 NETO2Q8NC67 525 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 CCDC26Q8TAB7 109 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 EPS8L1Q8TE68 723 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 TOP1MTQ969P6 601 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 TWNKQ96RR1 684 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 EPAS1Q99814 870 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 NFKBIZQ9BYH8 718 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 FBXO44Q9H4M3 255 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 SP110Q9HB58 689 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 MARCH2Q9P0N8 246 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 SIX4Q9UIU6 781 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 TTC7AQ9ULT0 858 aaPredicted RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 SIK3Q9Y2K2 1263 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 STXBP5LQ9Y2K9 1186 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 FAM169AQ9Y6X4 670 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 DICER1Q9UPY3 1922 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 A0A1W2PRU2 124 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 CCDC78A2IDD5 438 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 EIF3CLB5ME19 914 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 DDX3XO00571 662 aaKnown RBP eCLIP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 MSI1O43347 362 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 TLR5O60602 858 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms