RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ZNF276Q8N554 614 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 TXNDC5Q8NBS9 432 aaKnown RBP9.67□□□□□ -0.86
HDAC3-212ENST00000492407 CEP76Q8TAP6 659 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 ZFRQ96KR1 1074 aaKnown RBP9.67□□□□□ -0.86
HDAC3-212ENST00000492407 KCNK16Q96T55 309 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 FAM124BQ9H5Z6 455 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-212ENST00000492407 SLC39A2Q9NP94 309 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 TMEM9BQ9NQ34 198 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 SPHK2Q9NRA0 654 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 TMEM30AQ9NV96 361 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 POLR3BQ9NW08 1133 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-212ENST00000492407 SMPD4Q9NXE4 827 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 WDR35Q9P2L0 1181 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 DEC1Q9P2X7 70 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 RCOR1Q9UKL0 485 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 PCDHA7Q9UN72 937 aa9.67□□□□□ -0.86
HDAC3-212ENST00000492407 GREB1Q4ZG55 1949 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 OBSL1O75147 1896 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 LNP1A1A4G5 178 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 TBC1D3BA6NDS4 549 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 LRRIQ3A6PVS8 624 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-212ENST00000492407 C4orf47A7E2U8 309 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 UPK3BL1B0FP48 263 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 UPK3BL2E5RIL1 263 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 SGK1O00141 431 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 CLDN5O00501 218 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 MAP3K13O43283 966 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 ZNF217O75362 1048 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 KLF8O95600 359 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-212ENST00000492407 F13A1P00488 732 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 ZSCAN22P10073 491 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-212ENST00000492407 ME1P48163 572 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 SLC5A3P53794 718 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 GOLGA8FQ08AF8 430 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 GOLGA8DPQ0D2H9 430 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 E2F5Q15329 346 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 NFIL3Q16649 462 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 LY6G5CQ5SRR4 150 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 SLC23A3Q6PIS1 610 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 TMEM92Q6UXU6 159 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 TADA2BQ86TJ2 420 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 SYT12Q8IV01 421 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 FUKQ8N0W3 1084 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 TTC39CQ8N584 583 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 CCDC33Q8N5R6 958 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 ALLCQ8N6M5 410 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 HNRNPABQ99729 332 aaKnown RBP9.66□□□□□ -0.86
HDAC3-212ENST00000492407 MED10Q9BTT4 135 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 TPSD1Q9BZJ3 242 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 SMYD3Q9H7B4 428 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 CYP3A43Q9HB55 503 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 CYLDQ9NQC7 956 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.66□□□□□ -0.862e-13■■■■■ 130.4
HDAC3-212ENST00000492407 TLR8Q9NR97 1041 aaKnown RBP9.66□□□□□ -0.86
HDAC3-212ENST00000492407 MARK1Q9P0L2 795 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 CHORDC1Q9UHD1 332 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-212ENST00000492407 TRAF3IP3Q9Y228 551 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 PCDHA5Q9Y5H7 936 aa9.66□□□□□ -0.86
HDAC3-212ENST00000492407 TPRP12270 2363 aaKnown RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 GFRA2O00451 464 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 CDX4O14627 284 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 NPC1O15118 1278 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 ZBTB24O43167 697 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 AP5Z1O43299 807 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 CALUO43852 315 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 KLRC4O43908 158 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 GREM1O60565 184 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 TULP3O75386 442 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 AP1G2O75843 785 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 KRT37O76014 449 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 VNN1O95497 513 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 ASS1P00966 412 aaKnown RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 PROS1P07225 676 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 CMA1P23946 247 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 TIE1P35590 1138 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 ATP5C1P36542 298 aaKnown RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 DHPSP49366 369 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 NOVA1P51513 510 aaKnown RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 ZNF132P52740 706 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 CDH8P55286 799 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 SLC20A2Q08357 652 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 INCA1Q0VD86 236 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 STK4Q13043 487 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 CUL4BQ13620 913 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 MAP7D1Q3KQU3 841 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 TCEAL6Q6IPX3 200 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 SDE2Q6IQ49 451 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 SV2AQ7L0J3 742 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 C12orf40Q86WS4 652 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 TERB1Q8NA31 727 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 SCAMP5Q8TAC9 235 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 PLEKHO2Q8TD55 490 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 TCEAL3Q969E4 200 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 PAGE5Q96GU1 130 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 XPO6Q96QU8 1125 aaKnown RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 CDK5RAP1Q96SZ6 601 aaKnown RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 SMOQ99835 787 aa9.65□□□□□ -0.86
HDAC3-212ENST00000492407 KLF16Q9BXK1 252 aaPredicted RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 NUSAP1Q9BXS6 441 aaKnown RBP9.65□□□□□ -0.86
HDAC3-212ENST00000492407 UBXN6Q9BZV1 441 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms