RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 ENGASEQ8NFI3 743 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 OLIG1Q8TAK6 271 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 SLC2A14Q8TDB8 520 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 TAS1R2Q8TE23 839 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 FBXO32Q969P5 355 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 ACDQ96AP0 544 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 TWNKQ96RR1 684 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 KLF16Q9BXK1 252 aaPredicted RBP8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 UBXN6Q9BZV1 441 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 DUSP15Q9H1R2 295 aaPredicted RBP8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 FBXO44Q9H4M3 255 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 KRT82Q9NSB4 513 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 CDV3Q9UKY7 258 aaKnown RBP8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 MMP17Q9ULZ9 603 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 USP18Q9UMW8 372 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 SCML2Q9UQR0 700 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 USP3Q9Y6I4 520 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 PCNX2A6NKB5 2137 aa8.87□□□□□ -0.99
SMARCB1-207ENST00000491967 AP1G2O75843 785 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 KAT7O95251 611 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 ADH1CP00326 375 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 MBL2P11226 248 aaPredicted RBP8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 CCDC130P13994 396 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 HNRNPLP14866 589 aaKnown RBP eCLIP8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 GRIA2P42262 883 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 GCLMP48507 274 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 ADAM9Q13443 819 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 CRY1Q16526 586 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 LY6G5CQ5SRR4 150 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 CEP135Q66GS9 1140 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 CLEC20AQ6ZU45 233 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 CEP68Q76N32 757 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 C12orf40Q86WS4 652 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 SFTPA1Q8IWL2 248 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 IL17RCQ8NAC3 791 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 SEMA4DQ92854 862 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 WBP2Q969T9 261 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 CNOT6LQ96LI5 555 aaKnown RBP8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 HHIPQ96QV1 700 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 PNKPQ96T60 521 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 CCSER2Q9H7U1 834 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 TMEM8AQ9HCN3 771 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 CD248Q9HCU0 757 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 OSER1Q9NX31 292 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 SMPD4Q9NXE4 827 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 GMIPQ9P107 970 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 HCN2Q9UL51 889 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 COQ4Q9Y3A0 265 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 STARD13Q9Y3M8 1113 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 PCDHA5Q9Y5H7 936 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 TNRC6BQ9UPQ9 1833 aaKnown RBP8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 CHD8Q9HCK8 2581 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 CACNA1BQ00975 2339 aa8.86□□□□□ -0.99
SMARCB1-207ENST00000491967 ASCC3Q8N3C0 2202 aaKnown RBP8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 BCLAF3A2AJT9 711 aaKnown RBP8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 DCDC2BA2VCK2 349 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 GDF9O60383 454 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 TLR5O60602 858 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 ADAM23O75077 832 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 ADH5P11766 374 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 DGKEP52429 567 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 KIF11P52732 1056 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 MAP3K7CLP57077 242 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 GAD2Q05329 585 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 KRT39Q6A163 491 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 TMEM92Q6UXU6 159 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 SCARA5Q6ZMJ2 495 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 Q6ZNB5 142 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 GPRIN1Q7Z2K8 1008 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 CCDC186Q7Z3E2 898 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 SCD5Q86SK9 330 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 TMEM25Q86YD3 366 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 BBS7Q8IWZ6 715 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 ELOA2Q8IYF1 753 aaPredicted RBP8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 FAM186BQ8IYM0 893 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 TTC39CQ8N584 583 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 CCDC47Q96A33 483 aaKnown RBP8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 CYFIP2Q96F07 1278 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 GSDMAQ96QA5 445 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 MED10Q9BTT4 135 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 NT5C1AQ9BXI3 368 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 DUSP16Q9BY84 665 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 NIF3L1Q9GZT8 377 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 ARRDC1-AS1Q9H2J1 176 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 NMUR1Q9HB89 426 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 TLR8Q9NR97 1041 aaKnown RBP8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 FAM49BQ9NUQ9 324 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 CLIC5Q9NZA1 410 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 MARK1Q9P0L2 795 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 FBXO10Q9UK96 956 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 MAPK8IP1Q9UQF2 711 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 CACNA1EQ15878 2313 aa8.85□□□□□ -0.99
SMARCB1-207ENST00000491967 LAMA1P25391 3075 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 CEP192Q8TEP8 1941 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 SGK1O00141 431 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 PMM2O15305 246 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms