RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RHOBTB1O94844 696 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 GNA14O95837 355 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 GRIA2P42262 883 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 PLA2G4AP47712 749 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 DMC1Q14565 340 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 E2F5Q15329 346 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 LPAL2Q16609 132 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 ANO4Q32M45 955 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 ANKRD40Q6AI12 368 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 TRIML1Q8N9V2 468 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 TSTD1Q8NFU3 115 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 GAB3Q8WWW8 586 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 ELMO3Q96BJ8 720 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 EEF2KMTQ96G04 330 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 LOXL4Q96JB6 756 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 UBXN6Q9BZV1 441 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 ARHGEF4Q9NR80 690 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 CISHQ9NSE2 258 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 WDR35Q9P2L0 1181 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 DNMT3LQ9UJW3 386 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 NAGPAQ9UK23 515 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 KIAA1257Q9ULG3 409 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 STRIP2Q9ULQ0 834 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 ZNF510Q9Y2H8 683 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 TBC1D3BA6NDS4 549 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 CYP17A1P05093 508 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 ZDHHC11BP0C7U3 371 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 DGKEP52429 567 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 COG7P83436 770 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 BYSLQ13895 437 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 USP39Q53GS9 565 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 EOGTQ5NDL2 527 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 C10orf120Q5SQS8 335 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 SDE2Q6IQ49 451 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 KLHDC10Q6PID8 442 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 CLEC17AQ6ZS10 378 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 CLEC20AQ6ZU45 233 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 RSRC2Q7L4I2 434 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 DGLUCYQ7Z3D6 616 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 RIN3Q8TB24 985 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 DUSP9Q99956 384 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 CCSER2Q9H7U1 834 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 APOBEC3GQ9HC16 384 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 POLMQ9NP87 494 aaPredicted RBP17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 DEC1Q9P2X7 70 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 HMGXB4Q9UGU5 601 aa17.46■□□□□ 0.39
PDLIM2-217ENST00000491330 CACNA1IQ9P0X4 2223 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 RIF1Q5UIP0 2472 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 HRO43593 1189 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 KAT7O95251 611 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 IRF1P10914 325 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 TNFRSF4P43489 277 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 C2orf27AQ580R0 203 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 LY6G5CQ5SRR4 150 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 KCNV2Q8TDN2 545 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 DCLK3Q9C098 648 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 LRRC4Q9HBW1 653 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 FBRSL1Q9HCM7 1045 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 CYLDQ9NQC7 956 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 TMEM30AQ9NV96 361 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 CLIC5Q9NZA1 410 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 COL4A3Q01955 1670 aa17.45■□□□□ 0.38
PDLIM2-217ENST00000491330 WDFY4Q6ZS81 3184 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 FAM186AA6NE01 2351 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 RARGP13631 454 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 CD19P15391 556 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 SEC13P55735 322 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 CUL2Q13617 745 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 SGO2Q562F6 1265 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 KLHL10Q6JEL2 608 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 RHBDF2Q6PJF5 856 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 HTR3DQ70Z44 454 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 CCDC186Q7Z3E2 898 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 ZC3H3Q8IXZ2 948 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 C12orf50Q8NA57 414 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 ZMIZ2Q8NF64 920 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 NT5C1BQ96P26 610 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 IPO9Q96P70 1041 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 SPHK2Q9NRA0 654 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 EBF1Q9UH73 591 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 COQ4Q9Y3A0 265 aa17.44■□□□□ 0.38
PDLIM2-217ENST00000491330 PTPRDP23468 1912 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 DENND4CQ5VZ89 1909 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 P4HA2O15460 535 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 BEST1O76090 585 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 CHKAP35790 457 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 KIF11P52732 1056 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 SPEM2Q0P670 501 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 CSRP2Q16527 193 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 PPP1R26Q5T8A7 1209 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 ARHGAP17Q68EM7 881 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 ISM2Q6H9L7 571 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 TTC30AQ86WT1 665 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 ANKRD52Q8NB46 1076 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 USP33Q8TEY7 942 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 GOLGA1Q92805 767 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 HHIPQ96QV1 700 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 TWNKQ96RR1 684 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 OLA1Q9NTK5 396 aaKnown RBP17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 BCCIPQ9P287 314 aaKnown RBP eCLIP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms