RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 PACSIN1Q9BY11 444 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 PARD6BQ9BYG5 372 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 UBXN6Q9BZV1 441 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 IMPG2Q9BZV3 1241 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 KRT23Q9C075 422 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SIL1Q9H173 461 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 FOXP1Q9H334 677 aaPredicted RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 FBXO34Q9NWN3 711 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC5A4Q9NY91 659 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 MCM8Q9UJA3 840 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 CDC23Q9UJX2 597 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 CCNL1Q9UK58 526 aaPredicted RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 ADAM21Q9UKJ8 722 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 L1RE1Q9UN81 338 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 PPP2R2CQ9Y2T4 447 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 CHST2Q9Y4C5 530 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 RIPOR2Q9Y4F9 1068 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 CLIC4Q9Y696 253 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 NALCNQ8IZF0 1738 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 PEAK1Q9H792 1746 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 OVOS2A0A0G2JMS6 1433 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 NPHP4O75161 1426 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 NCAPD2Q15021 1401 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 RGPD2P0DJD1 1756 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 KDM3BQ7LBC6 1761 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SCN11AQ9UI33 1791 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PALLDQ8WX93 1383 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ABCC12Q96J65 1359 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PLEKHG2Q9H7P9 1386 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 JCADQ9P266 1359 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 MED23Q9ULK4 1368 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 UBR1Q8IWV7 1749 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 WDR17Q8IZU2 1322 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SALL1Q9NSC2 1324 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 KLF18A0A0U1RQI7 1052 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ERICH2A1L162 156 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 KLHL33A6NCF5 533 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 MYADML2A6NDP7 307 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 USP27XA6NNY8 438 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 AKR1B15C9JRZ8 316 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ENPP3O14638 875 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 POLR2DO15514 142 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ZBTB43O43298 467 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PRPF3O43395 683 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PRC1O43663 620 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 KIF5CO60282 957 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 RPS6KA5O75582 802 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PRSS23O95084 383 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PDE8BO95263 885 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 DEXIO95424 95 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 STARD3NLO95772 234 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 IGLV2-14P01704 120 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PCCAP05165 728 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 IVLP07476 585 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 CHRM2P08172 466 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC175P0C221 793 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PNMA6AP0CW24 399 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 CALM1P0DP23 149 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 CALM2P0DP24 149 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 CALM3P0DP25 149 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 MYBL2P10244 700 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 EGR2P11161 476 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PCP11498 1178 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PHKG2P15735 406 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PFKFB1P16118 471 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 IFNAR1P17181 557 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 GPD1P21695 349 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ZFP36P26651 326 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 MARCKSP29966 332 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ADRA1BP35368 520 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PPP1R2P41236 205 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 IL12RB1P42701 662 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 MCAMP43121 646 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 RARRES1P49788 294 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 NT5C2P49902 561 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 C21orf58P58505 322 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 GNG11P61952 73 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 NOMO3P69849 1222 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 KRT83P78385 493 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 AKAP17AQ02040 695 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 OCA2Q04671 838 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 IFIT5Q13325 482 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC39A6Q13433 755 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 MORC3Q14149 939 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SMC1AQ14683 1233 aaKnown RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF169Q14929 603 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 GEN1Q17RS7 908 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ANO4Q32M45 955 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 UAP1L1Q3KQV9 507 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 TMEM119Q4V9L6 283 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ARHGAP29Q52LW3 1261 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PRR16Q569H4 304 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 NOMO2Q5JPE7 1267 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 TTC39AQ5SRH9 613 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC9C2Q5TAH2 1124 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 B3GNTL1Q67FW5 361 aaPredicted RBP2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 ISM2Q6H9L7 571 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 PPP4R3AQ6IN85 833 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 KRTAP5-3Q6L8H2 238 aa2.26□□□□□ -2.05
SNRNP40-207ENST00000491106 FBXO38Q6PIJ6 1188 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms