RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 SIGLEC16A6NMB1 481 aa11.6□□□□□ -0.55
VPS72-205ENST00000491094 STK10O94804 968 aaKnown RBP11.6□□□□□ -0.55
VPS72-205ENST00000491094 DLDP09622 509 aaKnown RBP11.6□□□□□ -0.55
VPS72-205ENST00000491094 TCF7P36402 384 aaPredicted RBP11.6□□□□□ -0.55
VPS72-205ENST00000491094 ZBTB8OSQ8IWT0 167 aa11.6□□□□□ -0.55
VPS72-205ENST00000491094 PPP1R13LQ8WUF5 828 aa11.6□□□□□ -0.55
VPS72-205ENST00000491094 DEPDC1BQ8WUY9 529 aa11.6□□□□□ -0.55
VPS72-205ENST00000491094 ALKBH8Q96BT7 664 aaKnown RBP11.6□□□□□ -0.55
VPS72-205ENST00000491094 ACAD9Q9H845 621 aa11.6□□□□□ -0.55
VPS72-205ENST00000491094 STRIP2Q9ULQ0 834 aa11.6□□□□□ -0.55
VPS72-205ENST00000491094 MYH9P35579 1960 aaKnown RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 LMNAP02545 664 aaKnown RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 SERPINB6P35237 376 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 BACE1P56817 501 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 SLC25A11Q02978 314 aaKnown RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 LRRC38Q5VT99 294 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 AP1ARQ63HQ0 302 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 RGS9BPQ6ZS82 235 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 SLC26A11Q86WA9 606 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 SCUBE1Q8IWY4 988 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 SCUBE3Q8IX30 993 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 CDHR1Q96JP9 859 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 C6orf222P0C671 652 aaPredicted RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 PDE1BQ01064 536 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 AMHR2Q16671 573 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 LGSNQ5TDP6 509 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 RIPOR1Q6ZS17 1223 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 ARHGAP24Q8N264 748 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 MPP5Q8N3R9 675 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 PHC3Q8NDX5 983 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 GSTCDQ8NEC7 633 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 PEBP4Q96S96 227 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 GMLQ99445 158 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 CYLDQ9NQC7 956 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 AFG3L2Q9Y4W6 797 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 MYO18AQ92614 2054 aaKnown RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 A6NHS1 94 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 APOC4-APOC2K7ER74 178 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 OGTO15294 1046 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 MICAL2O94851 1124 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 SORBS2O94875 1100 aaKnown RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 APOC2P02655 101 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 NFICP08651 508 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 DPEP1P16444 411 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 OSBPP22059 807 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 EIF4BP23588 611 aaKnown RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 ATXN1P54253 815 aaKnown RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 SATB1Q01826 763 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 GRIK3Q13003 919 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 CDCA2Q69YH5 1023 aaPredicted RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 DRICH1Q6PGQ1 229 aaPredicted RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 DENND5BQ6ZUT9 1274 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 FAM83AQ86UY5 434 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 SLC44A1Q8WWI5 657 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 TEX13BQ9BXU2 312 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 TRIM4Q9C037 500 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 DHX35Q9H5Z1 703 aaKnown RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 DHX33Q9H6R0 707 aaKnown RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 RPF1Q9H9Y2 349 aaKnown RBP11.59□□□□□ -0.55
VPS72-205ENST00000491094 ASNSD1Q9NWL6 643 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 WNK3Q9BYP7 1800 aa11.59□□□□□ -0.55
VPS72-205ENST00000491094 ETS2P15036 469 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 CALRP27797 417 aaKnown RBP11.58□□□□□ -0.56
VPS72-205ENST00000491094 GTF2A2P52657 109 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 LAMTOR4Q0VGL1 99 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 STX3Q13277 289 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 PRKD1Q15139 912 aaPredicted RBP11.58□□□□□ -0.56
VPS72-205ENST00000491094 TTC39BQ5VTQ0 682 aaPredicted RBP11.58□□□□□ -0.56
VPS72-205ENST00000491094 KBTBD2Q8IY47 623 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 ZNF276Q8N554 614 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 ZNF280CQ8ND82 737 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 RDM1Q8NG50 284 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 LPIN3Q9BQK8 851 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 B3GNT5Q9BYG0 378 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 C3orf70A6NLC5 250 aaPredicted RBP11.58□□□□□ -0.56
VPS72-205ENST00000491094 MAFGO15525 162 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 TBC1D12O60347 775 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 PAPOLAP51003 745 aaKnown RBP11.58□□□□□ -0.56
VPS72-205ENST00000491094 VWA5B1Q5TIE3 1220 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 WDR49Q8IV35 697 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 PTCD3Q96EY7 689 aaKnown RBP11.58□□□□□ -0.56
VPS72-205ENST00000491094 C20orf27Q9GZN8 174 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 TRUB2O95900 331 aaKnown RBP11.58□□□□□ -0.56
VPS72-205ENST00000491094 CSH1P0DML2 217 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 CSH2P0DML3 217 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 MSX2P35548 267 aaPredicted RBP11.58□□□□□ -0.56
VPS72-205ENST00000491094 PTPN11Q06124 597 aaPredicted RBP11.58□□□□□ -0.56
VPS72-205ENST00000491094 CA9Q16790 459 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 XYLT1Q86Y38 959 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 SH3TC2Q8TF17 1288 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 CPB2Q96IY4 423 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 SDCBP2Q9H190 292 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 MAN1C1Q9NR34 630 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 SMYD2Q9NRG4 433 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 HACL1Q9UJ83 578 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 DNAJC16Q9Y2G8 782 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 LRCH1Q9Y2L9 728 aa11.58□□□□□ -0.56
VPS72-205ENST00000491094 CCDC160A6NGH7 325 aa11.57□□□□□ -0.56
VPS72-205ENST00000491094 LSM8O95777 96 aaKnown RBP11.57□□□□□ -0.56
VPS72-205ENST00000491094 PGK2P07205 417 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms