RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 OTUD4Q01804 1114 aaKnown RBP14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 STARD3Q14849 445 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 HECTD3Q5T447 861 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 PLPP4Q5VZY2 271 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 CNOT10Q9H9A5 744 aaKnown RBP14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 CRYBG1Q9Y4K1 1723 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 TSPAN1O60635 241 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 CALCAP01258 141 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 BRAFP15056 766 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 VEGFBP49765 207 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 CENPCQ03188 943 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 PDCLQ13371 301 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 NAA30Q147X3 362 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 ACTL9Q8TC94 416 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 CERS4Q9HA82 394 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 ZNF197O14709 1029 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 CCND3P30281 292 aaPredicted RBP14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 CASP2P42575 452 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 SFSWAPQ12872 951 aaKnown RBP14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 PTRHD1Q6GMV3 140 aaKnown RBP14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 LLGL2Q6P1M3 1020 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 DENND1BQ6P3S1 775 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 TBCBQ99426 244 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 EIF2AQ9BY44 585 aaKnown RBP14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 SEZ6LQ9BYH1 1024 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 BCAS3Q9H6U6 928 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 ATP13A1Q9HD20 1204 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 BAG5Q9UL15 447 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 GOLGA8QA0A0J9YX86 632 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 GOLGA8OA6NCC3 632 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 HMGB1P1B2RPK0 211 aaPredicted RBP14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 GOLGA8NF8WBI6 632 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 B4GALT4O60513 344 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 SCNN1BP51168 640 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 SP2Q02086 613 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 MCL1Q07820 350 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 SLC35G1Q2M3R5 365 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 SDHAF4Q5VUM1 108 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 NUGGCQ68CJ6 796 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 TIGD7Q6NT04 549 aaPredicted RBP14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 FGFBP2Q9BYJ0 223 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 C11orf49Q9H6J7 331 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 RBM22Q9NW64 420 aaKnown RBP eCLIP14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 TUBGCP4Q9UGJ1 667 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 MRPL42Q9Y6G3 142 aaKnown RBP14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 NVLO15381 856 aaKnown RBP14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 C22orf31O95567 290 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 GLUD1P00367 558 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 HIST1H2AGP0C0S8 130 aaPredicted RBP14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 HIST1H2ADP20671 130 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 GLUD2P49448 558 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 WDR75Q8IWA0 830 aaKnown RBP14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 LGI2Q8N0V4 545 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 C12orf29Q8N999 325 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 MYLPFQ96A32 169 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 HIST1H2AHQ96KK5 128 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 HIST1H2AJQ99878 128 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 H2AFJQ9BTM1 129 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 DCLK3Q9C098 648 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 MLXIPLQ9NP71 852 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 ABCC13Q9NSE7 274 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 ARHGEF38Q9NXL2 777 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 CRLS1Q9UJA2 301 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 FBXL21Q9UKT6 434 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 CDY1Q9Y6F8 540 aa14.91□□□□□ -0.02
ARHGEF39-205ENST00000490638 SPTLC1O15269 473 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 GJB6O95452 261 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 POLBP06746 335 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 CREMQ03060 361 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 DMTNQ08495 405 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 ZRANB3Q5FWF4 1079 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 ERMARDQ5T6L9 678 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 C4orf22Q6V702 233 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 C12orf56Q8IXR9 622 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 HS6ST3Q8IZP7 471 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 ANKRD52Q8NB46 1076 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 EXD1Q8NHP7 514 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 SHC3Q92529 594 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 XPO6Q96QU8 1125 aaKnown RBP14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 C20orf96Q9NUD7 363 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 BCAP29Q9UHQ4 241 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 OR6C75A6NL08 312 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 TRUB2O95900 331 aaKnown RBP14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 SPATA31D3P0C874 917 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 SYN1P17600 705 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 COILP38432 576 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 DUSP4Q13115 394 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 ZNF792Q3KQV3 632 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 SYTL3Q4VX76 610 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 MARC1Q5VT66 337 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 SPATA31D4Q6ZUB0 917 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 EPM2AIP1Q7L775 607 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 C3orf20Q8ND61 904 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 APOL2Q9BQE5 337 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 ERP44Q9BS26 406 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 UBE2OQ9C0C9 1292 aaKnown RBP14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 PDZD7Q9H5P4 517 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 GTSE1Q9NYZ3 720 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 VANGL2Q9ULK5 521 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 GFAPP14136 432 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms