RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 GRIK1P39086 918 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 PSMC1P62191 440 aaKnown RBP8.73□□□□□ -1.01
USP39-216ENST00000490193 RPL6Q02878 288 aaKnown RBP8.73□□□□□ -1.01
USP39-216ENST00000490193 GAD2Q05329 585 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 KDSRQ06136 332 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 ZNF33AQ06730 810 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 LY6G5CQ5SRR4 150 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 CHCHD4Q8N4Q1 142 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 TERB1Q8NA31 727 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 RASSF8Q8NHQ8 419 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 ADAMTS14Q8WXS8 1223 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 OVCA2Q8WZ82 227 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 HPDLQ96IR7 371 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 ANKRD36BP1Q96IX9 119 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 FAM84AQ96KN4 292 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 ZFRQ96KR1 1074 aaKnown RBP8.73□□□□□ -1.01
USP39-216ENST00000490193 SLITRK1Q96PX8 696 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 CBWD1Q9BRT8 395 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 GTPBP2Q9BX10 602 aaKnown RBP8.73□□□□□ -1.01
USP39-216ENST00000490193 MRPL44Q9H9J2 332 aaKnown RBP8.73□□□□□ -1.01
USP39-216ENST00000490193 PDE11AQ9HCR9 933 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 INTS13Q9NVM9 706 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 CFAP97Q9P2B7 532 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 STARD13Q9Y3M8 1113 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 PTPRJQ12913 1337 aa8.73□□□□□ -1.01
USP39-216ENST00000490193 A0A1W2PQF6 199 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 FRMD3A2A2Y4 597 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 ZNF217O75362 1048 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 TULP3O75386 442 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 TACC1O75410 805 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 NTSR1P30989 418 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 TUBP50607 506 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 CASP5P51878 434 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 CYP27A1Q02318 531 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 SCAPQ12770 1279 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 TAF10Q12962 218 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 SURF1Q15526 300 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 PROX2Q3B8N5 592 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 SOWAHCQ53LP3 525 aaPredicted RBP8.72□□□□□ -1.01
USP39-216ENST00000490193 SNX30Q5VWJ9 437 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 TDRD10Q5VZ19 366 aaKnown RBP8.72□□□□□ -1.01
USP39-216ENST00000490193 NUDT18Q6ZVK8 323 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 DYMQ7RTS9 669 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 GLRX5Q86SX6 157 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 SLC41A1Q8IVJ1 513 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 PGBD3Q8N328 593 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 GPD1LQ8N335 351 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 ZNF513Q8N8E2 541 aaPredicted RBP8.72□□□□□ -1.01
USP39-216ENST00000490193 PDZD8Q8NEN9 1154 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 OR5B17Q8NGF7 314 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 ELOVL4Q9GZR5 314 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 FAM124BQ9H5Z6 455 aaPredicted RBP8.72□□□□□ -1.01
USP39-216ENST00000490193 ZDHHC4Q9NPG8 344 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 FSCN3Q9NQT6 498 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 TMEM30AQ9NV96 361 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 SMPD4Q9NXE4 827 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 CALCOCO1Q9P1Z2 691 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 DEC1Q9P2X7 70 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 HCN2Q9UL51 889 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 PCDHGA10Q9Y5H3 936 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 CELSR3Q9NYQ7 3312 aa8.72□□□□□ -1.01
USP39-216ENST00000490193 ASH1LQ9NR48 2969 aaKnown RBP8.72□□□□□ -1.01
USP39-216ENST00000490193 ACACAQ13085 2346 aa8.71□□□□□ -1.01
USP39-216ENST00000490193 FAM92AA1XBS5 289 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 GOLGA8IPA6NC78 632 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 TBC1D3BA6NDS4 549 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 GOLGA8JA6NMD2 632 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 H3BQV1 296 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 SCAMP3O14828 347 aaKnown RBP8.71□□□□□ -1.02
USP39-216ENST00000490193 RTN3O95197 1032 aaPredicted RBP8.71□□□□□ -1.02
USP39-216ENST00000490193 GCNT3O95395 438 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 TNNC2P02585 160 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 PDGFRBP09619 1106 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 FTH1P19P0C7X4 201 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 MBL2P11226 248 aaPredicted RBP8.71□□□□□ -1.02
USP39-216ENST00000490193 HOXB2P14652 356 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 GJB2P29033 226 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 CACNA2D1P54289 1103 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 TRIP6Q15654 476 aaKnown RBP8.71□□□□□ -1.02
USP39-216ENST00000490193 DUOXA2Q1HG44 320 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 MDH1BQ5I0G3 518 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 BTBD8Q5XKL5 378 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 CCNI2Q6ZMN8 369 aaPredicted RBP8.71□□□□□ -1.02
USP39-216ENST00000490193 USP49Q70CQ1 688 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 BRAPQ7Z569 592 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 PDZD3Q86UT5 571 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 WDR49Q8IV35 697 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 NUP93Q8N1F7 819 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 OR2I1PQ8NGU4 316 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 ZNF419Q96HQ0 510 aaPredicted RBP8.71□□□□□ -1.02
USP39-216ENST00000490193 EPSTI1Q96J88 318 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 GABRG3Q99928 467 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 ZDHHC5Q9C0B5 715 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 SPHK2Q9NRA0 654 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 IL37Q9NZH6 218 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 DKK4Q9UBT3 224 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 SUSD2Q9UGT4 822 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 R3HCC1Q9Y3T6 440 aaKnown RBP8.71□□□□□ -1.02
USP39-216ENST00000490193 NFE2L3Q9Y4A8 694 aa8.71□□□□□ -1.02
USP39-216ENST00000490193 NME7Q9Y5B8 376 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms