RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 TRPV4Q9HBA0 871 aa11.43□□□□□ -0.58
VPS13D-210ENST00000489961 SEPT11Q9NVA2 429 aaKnown RBP11.43□□□□□ -0.58
VPS13D-210ENST00000489961 CYTH4Q9UIA0 394 aa11.43□□□□□ -0.58
VPS13D-210ENST00000489961 NAGPAQ9UK23 515 aa11.43□□□□□ -0.58
VPS13D-210ENST00000489961 E5RJQ4 531 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 TLR5O60602 858 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 ECI2O75521 394 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 OAS1P00973 400 aaKnown RBP11.42□□□□□ -0.58
VPS13D-210ENST00000489961 RARGP13631 454 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 CHRNB2P17787 502 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 TNFAIP3P21580 790 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 ZNF75DP51815 510 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 DAOAP59103 153 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 YWHAGP61981 247 aaKnown RBP eCLIP11.42□□□□□ -0.58
VPS13D-210ENST00000489961 NOMO3P69849 1222 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 KLHL30Q0D2K2 578 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 NAA35Q5VZE5 725 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 BTBD8Q5XKL5 378 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 POTEHQ6S545 545 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 PARM1Q6UWI2 310 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 TMC6Q7Z403 805 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 SCD5Q86SK9 330 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 ERICH1Q86X53 443 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 RNF135Q8IUD6 432 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 FGF14Q92915 247 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 ELSPBP1Q96BH3 223 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 MRFAP1L1Q96HT8 127 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 CPXM1Q96SM3 734 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 TRIM62Q9BVG3 475 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 KIF9Q9HAQ2 790 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 KCNK12Q9HB15 430 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 NMUR1Q9HB89 426 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 TDP1Q9NUW8 608 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 OBP2AQ9NY56 170 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 CLIC5Q9NZA1 410 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 BZW2Q9Y6E2 419 aaKnown RBP11.42□□□□□ -0.58
VPS13D-210ENST00000489961 NUMBLQ9Y6R0 609 aa11.42□□□□□ -0.58
VPS13D-210ENST00000489961 YJEFN3A6XGL0 299 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 E7ENQ6 273 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 COCHO43405 550 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 GABBR2O75899 941 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 PRAMEF12O95522 483 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 OLFM2O95897 454 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 CYP1A1P04798 512 aaPredicted RBP11.41□□□□□ -0.58
VPS13D-210ENST00000489961 SERPING1P05155 500 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 ASGR2P07307 311 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 MBL2P11226 248 aaPredicted RBP11.41□□□□□ -0.58
VPS13D-210ENST00000489961 FCARP24071 287 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 ATP5C1P36542 298 aaKnown RBP11.41□□□□□ -0.58
VPS13D-210ENST00000489961 PRKCIP41743 596 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 SLC7A9P82251 487 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 ZNF268Q14587 947 aaPredicted RBP11.41□□□□□ -0.58
VPS13D-210ENST00000489961 TSR1Q2NL82 804 aaKnown RBP11.41□□□□□ -0.58
VPS13D-210ENST00000489961 PTPN20Q4JDL3 420 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 TDRD12Q587J7 1177 aaKnown RBP11.41□□□□□ -0.58
VPS13D-210ENST00000489961 TANGO2Q6ICL3 276 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 RSRC2Q7L4I2 434 aaKnown RBP11.41□□□□□ -0.58
VPS13D-210ENST00000489961 SCUBE3Q8IX30 993 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 ZNF276Q8N554 614 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 CELF5Q8N6W0 485 aaKnown RBP11.41□□□□□ -0.58
VPS13D-210ENST00000489961 DEPDC1BQ8WUY9 529 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 RSAD2Q8WXG1 361 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 NDRG1Q92597 394 aaKnown RBP11.41□□□□□ -0.58
VPS13D-210ENST00000489961 C18orf8Q96DM3 657 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 SLC22A12Q96S37 553 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 CYP2S1Q96SQ9 504 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 KXD1Q9BQD3 176 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 RNF38Q9H0F5 515 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 HAUS4Q9H6D7 363 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 CCSER2Q9H7U1 834 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 CD320Q9NPF0 282 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 ABCC13Q9NSE7 274 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 OLA1Q9NTK5 396 aaKnown RBP11.41□□□□□ -0.58
VPS13D-210ENST00000489961 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.41□□□□□ -0.58
VPS13D-210ENST00000489961 OSER1Q9NX31 292 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 ARHGAP26Q9UNA1 814 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 SORCS3Q9UPU3 1222 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 XIRP2A4UGR9 3374 aa11.41□□□□□ -0.58
VPS13D-210ENST00000489961 MYO10Q9HD67 2058 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 HEPACAM2A8MVW5 462 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 PAPSS1O43252 624 aaPredicted RBP11.4□□□□□ -0.58
VPS13D-210ENST00000489961 LTFP02788 710 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 ERBB2P04626 1255 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 SKILP12757 684 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 VIPR2P41587 438 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 NSFP46459 744 aaKnown RBP11.4□□□□□ -0.58
VPS13D-210ENST00000489961 PGFP49763 221 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 GOLGA8FQ08AF8 430 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 GOLGA8DPQ0D2H9 430 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 TDGQ13569 410 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 CLEC16AQ2KHT3 1053 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 EFHC1Q5JVL4 640 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 C10orf120Q5SQS8 335 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 BSPRYQ5W0U4 402 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 E4F1Q66K89 784 aaPredicted RBP11.4□□□□□ -0.58
VPS13D-210ENST00000489961 OR6B2Q6IFH4 312 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 PPP1R2P3Q6NXS1 205 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 KLHDC10Q6PID8 442 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 TOGARAM2Q6ZUX3 1019 aa11.4□□□□□ -0.58
VPS13D-210ENST00000489961 BHLHA9Q7RTU4 235 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms