RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 TRPC3Q13507 836 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 ANO4Q32M45 955 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 EPM2AIP1Q7L775 607 aaPredicted RBP18.01■□□□□ 0.47
TOP3B-217ENST00000489581 PIP4P1Q86T03 277 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 TMEM25Q86YD3 366 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 BBS7Q8IWZ6 715 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 NELFCDQ8IXH7 590 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 PDZD8Q8NEN9 1154 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 ZNF507Q8TCN5 953 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 ZCCHC14Q8WYQ9 949 aaKnown RBP18.01■□□□□ 0.47
TOP3B-217ENST00000489581 OVCA2Q8WZ82 227 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 WBP2Q969T9 261 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 ERLEC1Q96DZ1 483 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 MED10Q9BTT4 135 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 TRIM9Q9C026 710 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 TNMDQ9H2S6 317 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 CCSER2Q9H7U1 834 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 SPHK2Q9NRA0 654 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 DEC1Q9P2X7 70 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 SLC6A14Q9UN76 642 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 WDFY3Q8IZQ1 3526 aa18.01■□□□□ 0.47
TOP3B-217ENST00000489581 HOXC11O43248 304 aaPredicted RBP18■□□□□ 0.47
TOP3B-217ENST00000489581 AP5Z1O43299 807 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 IRF1P10914 325 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 HOXB3P14651 431 aaPredicted RBP18■□□□□ 0.47
TOP3B-217ENST00000489581 SLC5A3P53794 718 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 ASIC1P78348 528 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 SEMA3BQ13214 749 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 DUOXA1Q1HG43 343 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 C10orf76Q5T2E6 689 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 PEAR1Q5VY43 1037 aaPredicted RBP18■□□□□ 0.47
TOP3B-217ENST00000489581 TRMT11Q7Z4G4 463 aaKnown RBP18■□□□□ 0.47
TOP3B-217ENST00000489581 MIB1Q86YT6 1006 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 TERB1Q8NA31 727 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 LRRC27Q9C0I9 530 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 XYLT2Q9H1B5 865 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 KBTBD4Q9NVX7 518 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 GMIPQ9P107 970 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 KLK13Q9UKR3 277 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 HCN2Q9UL51 889 aa18■□□□□ 0.47
TOP3B-217ENST00000489581 PCDH15Q96QU1 1955 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 PHACTR2O75167 634 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 HOXB2P14652 356 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 GFPT1Q06210 699 aaPredicted RBP17.99■□□□□ 0.47
TOP3B-217ENST00000489581 ZNF33AQ06730 810 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 COL9A2Q14055 689 aaPredicted RBP17.99■□□□□ 0.47
TOP3B-217ENST00000489581 PREPLQ4J6C6 727 aaPredicted RBP17.99■□□□□ 0.47
TOP3B-217ENST00000489581 FAM26FQ5R3K3 315 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 SNX30Q5VWJ9 437 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 SLC36A4Q6YBV0 504 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 NUDT18Q6ZVK8 323 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 PAQR9Q6ZVX9 377 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 FAM35AQ86V20 835 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 HDDC3Q8N4P3 179 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 XXYLT1Q8NBI6 393 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 OR2I1PQ8NGU4 316 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 CEP76Q8TAP6 659 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 SYAP1Q96A49 352 aaPredicted RBP17.99■□□□□ 0.47
TOP3B-217ENST00000489581 ELMO3Q96BJ8 720 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 GZF1Q9H116 711 aaPredicted RBP17.99■□□□□ 0.47
TOP3B-217ENST00000489581 SMYD3Q9H7B4 428 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 CALCOCO1Q9P1Z2 691 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 NEUROG3Q9Y4Z2 214 aa17.99■□□□□ 0.47
TOP3B-217ENST00000489581 MORC2Q9Y6X9 1032 aaPredicted RBP17.99■□□□□ 0.47
TOP3B-217ENST00000489581 FASNP49327 2511 aaKnown RBP17.99■□□□□ 0.47
TOP3B-217ENST00000489581 ATP8B3O60423 1300 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 UPK3BL1B0FP48 263 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 UPK3BL2E5RIL1 263 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 OPHN1O60890 802 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 CLSTN1O94985 981 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 STAU1O95793 577 aaKnown RBP17.98■□□□□ 0.47
TOP3B-217ENST00000489581 SERPINF2P08697 491 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 NTSR1P30989 418 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 ATICP31939 592 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 HOXD12P35452 270 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 FAM193AP78312 1265 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 E2F4Q16254 413 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 EGFLAMQ63HQ2 1017 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 KCNV2Q8TDN2 545 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 DHX58Q96C10 678 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 ACOX2Q99424 681 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 NACA2Q9H009 215 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 CAPN10Q9HC96 672 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 IL37Q9NZH6 218 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 MSRB2Q9Y3D2 182 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 DMXL2Q8TDJ6 3036 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 KNL1Q8NG31 2342 aa17.98■□□□□ 0.47
TOP3B-217ENST00000489581 IGHV1OR15-9A0A0B4J2B8 117 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 A0A1W2PQF6 199 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 AP1G2O75843 785 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 ZDHHC11BP0C7U3 371 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 CASP4P49662 377 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 PGFP49763 221 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 TUBP50607 506 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 AMPD3Q01432 767 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 STK38Q15208 465 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 SCARA5Q6ZMJ2 495 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 SLC41A1Q8IVJ1 513 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 MINDY1Q8N5J2 469 aa17.97■□□□□ 0.47
TOP3B-217ENST00000489581 SCFD1Q8WVM8 642 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms