RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 MTMR3Q13615 1198 aa14.57□□□□□ -0.08
C9orf3-221ENST00000489562 BEND5Q7L4P6 421 aa14.57□□□□□ -0.08
C9orf3-221ENST00000489562 MYLIPQ8WY64 445 aa14.57□□□□□ -0.08
C9orf3-221ENST00000489562 RFFLQ8WZ73 363 aa14.57□□□□□ -0.08
C9orf3-221ENST00000489562 SMG7Q92540 1137 aaKnown RBP14.57□□□□□ -0.08
C9orf3-221ENST00000489562 FAM149B1Q96BN6 582 aa14.57□□□□□ -0.08
C9orf3-221ENST00000489562 PABPC5Q96DU9 382 aaKnown RBP14.57□□□□□ -0.08
C9orf3-221ENST00000489562 CALR3Q96L12 384 aaKnown RBP14.57□□□□□ -0.08
C9orf3-221ENST00000489562 GCNAQ96QF7 691 aa14.57□□□□□ -0.08
C9orf3-221ENST00000489562 TSGA10Q9BZW7 698 aa14.57□□□□□ -0.08
C9orf3-221ENST00000489562 TRPM5Q9NZQ8 1165 aa14.57□□□□□ -0.08
C9orf3-221ENST00000489562 LCMT1Q9UIC8 334 aa14.57□□□□□ -0.08
C9orf3-221ENST00000489562 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.57□□□□□ -0.08
C9orf3-221ENST00000489562 A0A0A6YYK5 440 aaPredicted RBP14.56□□□□□ -0.08
C9orf3-221ENST00000489562 SIGLEC16A6NMB1 481 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 BTNL10A8MVZ5 291 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 GOLGA8SH3BPF8 625 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 CCP110O43303 1012 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 ZSCAN12O43309 604 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 LTFP02788 710 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 ZDHHC11BP0C7U3 371 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 KRT3P12035 628 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 FOSL2P15408 326 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 YWHAGP61981 247 aaKnown RBP eCLIP14.56□□□□□ -0.08
C9orf3-221ENST00000489562 YWHAZP63104 245 aaKnown RBP14.56□□□□□ -0.08
C9orf3-221ENST00000489562 RBM10P98175 930 aaKnown RBP14.56□□□□□ -0.08
C9orf3-221ENST00000489562 ITIH3Q06033 890 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 KIF5AQ12840 1032 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 TCEAL1Q15170 157 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 C2CD6Q53TS8 623 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 SNX30Q5VWJ9 437 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 ZNF662Q6ZS27 426 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 Q7L0L9 218 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 BHLHA9Q7RTU4 235 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 MICALL1Q8N3F8 863 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 ZNF276Q8N554 614 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 STKLD1Q8NE28 680 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 ZNF707Q96C28 371 aaPredicted RBP14.56□□□□□ -0.08
C9orf3-221ENST00000489562 GUCD1Q96NT3 240 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 CDK5RAP1Q96SZ6 601 aaKnown RBP14.56□□□□□ -0.08
C9orf3-221ENST00000489562 PACSIN1Q9BY11 444 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 LRRC3Q9BY71 257 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 PIDD1Q9HB75 910 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 POPDC2Q9HBU9 364 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 ABCC13Q9NSE7 274 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 MTMR10Q9NXD2 777 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 CLDND1Q9NY35 253 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 CLIC5Q9NZA1 410 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 GMIPQ9P107 970 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 MYO1AQ9UBC5 1043 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 ZMYM5Q9UJ78 669 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 PPP2R2CQ9Y2T4 447 aa14.56□□□□□ -0.08
C9orf3-221ENST00000489562 HELZP42694 1942 aaKnown RBP14.56□□□□□ -0.08
C9orf3-221ENST00000489562 FAM170AA1A519 330 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 YJEFN3A6XGL0 299 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 SOBPA7XYQ1 873 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 E7ENQ6 273 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 ZNF197O14709 1029 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 LINC01565O15544 149 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 ATMINO43313 823 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-221ENST00000489562 KRT86O43790 486 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 DAB1O75553 588 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 RALAP11233 206 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 DESP17661 470 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 PFKLP17858 780 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 TUBP50607 506 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 MAMLD1Q13495 774 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 PPP1R15BQ5SWA1 713 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 RARS2Q5T160 578 aaKnown RBP14.55□□□□□ -0.08
C9orf3-221ENST00000489562 BSPRYQ5W0U4 402 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 BTBD8Q5XKL5 378 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 CES5AQ6NT32 575 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 DCUN1D2Q6PH85 259 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 SYCE2Q6PIF2 218 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 PDZD4Q76G19 769 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-221ENST00000489562 GPR149Q86SP6 731 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 TADA2BQ86TJ2 420 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 DNAAF5Q86Y56 855 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 TMC8Q8IU68 726 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 CLEC4CQ8WTT0 213 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 CORO1BQ9BR76 489 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 NUP85Q9BW27 656 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 IL21Q9HBE4 155 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 METTL5Q9NRN9 209 aaKnown RBP14.55□□□□□ -0.08
C9orf3-221ENST00000489562 OLA1Q9NTK5 396 aaKnown RBP14.55□□□□□ -0.08
C9orf3-221ENST00000489562 TMEM51Q9NW97 253 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 RRN3Q9NYV6 651 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 CTTNBP2NLQ9P2B4 639 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 TMEM59LQ9UK28 342 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 DENND4AQ7Z401 1863 aa14.55□□□□□ -0.08
C9orf3-221ENST00000489562 A0A1W2PQH9 124 aa14.54□□□□□ -0.08
C9orf3-221ENST00000489562 GOLGA6L9A6NEM1 432 aa14.54□□□□□ -0.08
C9orf3-221ENST00000489562 TBX10O75333 385 aa14.54□□□□□ -0.08
C9orf3-221ENST00000489562 MTA2O94776 668 aa14.54□□□□□ -0.08
C9orf3-221ENST00000489562 F11P03951 625 aa14.54□□□□□ -0.08
C9orf3-221ENST00000489562 RHOP08100 348 aa14.54□□□□□ -0.08
C9orf3-221ENST00000489562 GABRR2P28476 465 aa14.54□□□□□ -0.08
C9orf3-221ENST00000489562 HADHBP55084 474 aaKnown RBP14.54□□□□□ -0.08
C9orf3-221ENST00000489562 IFI16Q16666 785 aaKnown RBP14.54□□□□□ -0.08
C9orf3-221ENST00000489562 TMC5Q6UXY8 1006 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms