RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 DENND1BQ6P3S1 775 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 GLB1LQ6UWU2 654 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 CXCL17Q6UXB2 119 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 Q7L0L9 218 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 SLC26A9Q7LBE3 791 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 STRADAQ7RTN6 431 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 GSTA5Q7RTV2 222 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 FAM228AQ86W67 206 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 CDR2LQ86X02 465 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 XYLT1Q86Y38 959 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 TMEM192Q8IY95 271 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 SCML4Q8N228 414 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 PRELID2Q8N945 189 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 KCTD6Q8NC69 237 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 CMASQ8NFW8 434 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 FAM76AQ8TAV0 307 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 SLC35F5Q8WV83 523 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 TFAP2BQ92481 460 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 KRT35Q92764 455 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 NKD2Q969F2 451 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 ZNF668Q96K58 619 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 PPP1R10Q96QC0 940 aaKnown RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 PPP1R16BQ96T49 567 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 SLC9A7Q96T83 725 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 EIF2AQ9BY44 585 aaKnown RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 ROPN1BQ9BZX4 212 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 DCLK3Q9C098 648 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 ELOVL4Q9GZR5 314 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 NXF3Q9H4D5 531 aaKnown RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 ELAC1Q9H777 363 aaKnown RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 ROPN1Q9HAT0 212 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-208ENST00000489537 ACP6Q9NPH0 428 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 DONSONQ9NYP3 566 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 CDH9Q9ULB4 789 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 POLIQ9UNA4 740 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 ST3GAL5Q9UNP4 418 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 RAD54BQ9Y620 910 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 MYH10P35580 1976 aa6.66□□□□□ -1.34
SF3A3-208ENST00000489537 LRRD1A4D1F6 860 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 GOLGA6CA6NDK9 693 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 APOC4-APOC2K7ER74 178 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CYB561D2O14569 222 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 GABRDO14764 452 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 EIF3HO15372 352 aaKnown RBP eCLIP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 TTI1O43156 1089 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 PPFIA2O75334 1257 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CSDE1O75534 798 aaKnown RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 SEC31AO94979 1220 aaKnown RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 PGK1P00558 417 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 APOC2P02655 101 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CYP11A1P05108 521 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ITGAVP06756 1048 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ADH1AP07327 375 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 NUDT17P0C025 328 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 FAM200BP0CF97 657 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 GOLGA6DP0CG33 693 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 RARAP10276 462 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 RALAP11233 206 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 TSHRP16473 764 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ATP2A2P16615 1042 aaKnown RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 TYMPP19971 482 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 TGM2P21980 687 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 LORP23490 312 aaPredicted RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ITGB8P26012 769 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 OAS2P29728 719 aaKnown RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 HTR7P34969 479 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 RFC1P35251 1148 aaPredicted RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ADCY8P40145 1251 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CARSP49589 748 aaKnown RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ACLYP53396 1101 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CDH8P55286 799 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CBX1P83916 185 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 TSPY1Q01534 308 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ADCY2Q08462 1091 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 MGAT3Q09327 533 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 IFFO1Q0D2I5 559 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 TMEM62Q0P6H9 643 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ELAVL2Q12926 359 aaKnown RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 KLF1Q13351 362 aaPredicted RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 ZNF211Q13398 564 aaPredicted RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 SOWAHAQ2M3V2 549 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 GOLGA7BQ2TAP0 167 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 PTPN20Q4JDL3 420 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 UBXN11Q5T124 520 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 AGBL2Q5U5Z8 902 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 DENND2CQ68D51 928 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 CCSAPQ6IQ19 270 aaPredicted RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 GDF6Q6KF10 455 aaPredicted RBP6.65□□□□□ -1.34
SF3A3-208ENST00000489537 DCLRE1AQ6PJP8 1040 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 DSTYKQ6XUX3 929 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 SPOCD1Q6ZMY3 1216 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 C4orf50Q6ZRC1 276 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 BBS12Q6ZW61 710 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 SLC24A5Q71RS6 500 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 BEND5Q7L4P6 421 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 NECAB2Q7Z6G3 386 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 RELL1Q8IUW5 271 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 IQCKQ8N0W5 287 aa6.65□□□□□ -1.34
SF3A3-208ENST00000489537 WDTC1Q8N5D0 677 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms