RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 SH3BP1Q9Y3L3 701 aa14.1□□□□□ -0.15
CCL28-202ENST00000489442 A0A1W2PQH9 124 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 RNF225M0QZC1 329 aaPredicted RBP14.09□□□□□ -0.15
CCL28-202ENST00000489442 O00370 1275 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 XPO1O14980 1071 aaKnown RBP14.09□□□□□ -0.15
CCL28-202ENST00000489442 ZDHHC11BP0C7U3 371 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 SETSIPP0DME0 302 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 RALAP11233 206 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 RARGP13631 454 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 ARSAP15289 507 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 BRD2P25440 801 aaKnown RBP14.09□□□□□ -0.15
CCL28-202ENST00000489442 EEF1GP26641 437 aaKnown RBP14.09□□□□□ -0.15
CCL28-202ENST00000489442 PSEN1P49768 467 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 TKTL1P51854 596 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 GOLGA8FQ08AF8 430 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 GOLGA8DPQ0D2H9 430 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 TCF15Q12870 199 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 CNGA2Q16280 664 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 ARHGAP44Q17R89 818 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 TCP11X2Q5H9J9 407 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 LCLAT1Q6UWP7 414 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 CCDC186Q7Z3E2 898 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 ARHGAP18Q8N392 663 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 ATOH1Q92858 354 aaPredicted RBP14.09□□□□□ -0.15
CCL28-202ENST00000489442 KREMEN1Q96MU8 473 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 LINC00597Q9H2U6 94 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 ECT2Q9H8V3 914 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 LMAN1LQ9HAT1 526 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 HPS4Q9NQG7 708 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 DLGAP2Q9P1A6 1054 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 APEX2Q9UBZ4 518 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 WDR87Q6ZQQ6 2873 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 PIEZO1Q92508 2521 aa14.09□□□□□ -0.15
CCL28-202ENST00000489442 M0QYV0 167 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 NFATC1O95644 943 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 TBX18O95935 607 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 ZBED1O96006 694 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 IRF1P10914 325 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 PON1P27169 355 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 RPS9P46781 194 aaKnown RBP14.08□□□□□ -0.16
CCL28-202ENST00000489442 PGFP49763 221 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 ZXDBP98169 803 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 NHLH1Q02575 133 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 LRRC32Q14392 662 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 PON2Q15165 354 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 ANGPT1Q15389 498 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 EML3Q32P44 896 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 C10orf120Q5SQS8 335 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 CAVIN1Q6NZI2 390 aaKnown RBP14.08□□□□□ -0.16
CCL28-202ENST00000489442 GJB7Q6PEY0 223 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 C1orf210Q8IVY1 113 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 SIX6OS1Q8N1H7 587 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 ANKRD20A12PQ8NF67 263 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 TFAP2BQ92481 460 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 CLDN23Q96B33 292 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 CDK5RAP1Q96SZ6 601 aaKnown RBP14.08□□□□□ -0.16
CCL28-202ENST00000489442 NMUR1Q9HB89 426 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 TBC1D14Q9P2M4 693 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 USP3Q9Y6I4 520 aa14.08□□□□□ -0.16
CCL28-202ENST00000489442 E2F8A0AVK6 867 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 OTOL1A6NHN0 477 aaPredicted RBP14.07□□□□□ -0.16
CCL28-202ENST00000489442 SHISA7A6NL88 538 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 TULP2O00295 520 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 SCAMP3O14828 347 aaKnown RBP14.07□□□□□ -0.16
CCL28-202ENST00000489442 LAMTOR5O43504 91 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 MED7O43513 233 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 LETM1O95202 739 aaPredicted RBP14.07□□□□□ -0.16
CCL28-202ENST00000489442 CALCAP01258 141 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 PLA2G5P39877 138 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 MYL5Q02045 173 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 GRSF1Q12849 480 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCL28-202ENST00000489442 RAB41Q5JT25 222 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 MIIPQ5JXC2 388 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 DGKKQ5KSL6 1271 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 TXNDC11Q6PKC3 985 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 C11orf57Q6ZUT1 292 aaPredicted RBP14.07□□□□□ -0.16
CCL28-202ENST00000489442 RSRC2Q7L4I2 434 aaKnown RBP14.07□□□□□ -0.16
CCL28-202ENST00000489442 KIAA1958Q8N8K9 716 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 ULBP1Q9BZM6 244 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 NAT10Q9H0A0 1025 aaKnown RBP14.07□□□□□ -0.16
CCL28-202ENST00000489442 CYLDQ9NQC7 956 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCL28-202ENST00000489442 FANCLQ9NW38 375 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 OSER1Q9NX31 292 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 TMEM63CQ9P1W3 806 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 DNMT3LQ9UJW3 386 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 NUDT5Q9UKK9 219 aa14.07□□□□□ -0.16
CCL28-202ENST00000489442 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCL28-202ENST00000489442 ZFHX2Q9C0A1 2572 aaPredicted RBP14.07□□□□□ -0.16
CCL28-202ENST00000489442 THAP12O43422 761 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 LCP1P13796 627 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 CDK11BP21127 795 aaKnown RBP14.06□□□□□ -0.16
CCL28-202ENST00000489442 GNA15P30679 374 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 GJA4P35212 333 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 PLA2G4AP47712 749 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 RGS7P49802 495 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 ZNF132P52740 706 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 YWHAGP61981 247 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCL28-202ENST00000489442 APBA1Q02410 837 aa14.06□□□□□ -0.16
CCL28-202ENST00000489442 TYRO3Q06418 890 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms