RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 NDUFV1P49821 464 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 GEMIN4P57678 1058 aaKnown RBP4.99□□□□□ -1.61
XRN1-213ENST00000489241 BLOC1S1P78537 153 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 DDX10Q13206 875 aaKnown RBP4.99□□□□□ -1.61
XRN1-213ENST00000489241 TP53BP2Q13625 1128 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 KCNAB1Q14722 419 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 INSCQ1MX18 579 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 SLC5A9Q2M3M2 681 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 FBXO47Q5MNV8 452 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 INTS11Q5TA45 600 aaKnown RBP4.99□□□□□ -1.61
XRN1-213ENST00000489241 ABHD17BQ5VST6 288 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 OLFML1Q6UWY5 402 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 TICAM2Q86XR7 235 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 KRT73Q86Y46 540 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 ZNF280BQ86YH2 543 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 ADGRG5Q8IZF4 528 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 NME8Q8N427 588 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 SPPL3Q8TCT6 385 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 RILPL2Q969X0 211 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 FUBP1Q96AE4 644 aaKnown RBP4.99□□□□□ -1.61
XRN1-213ENST00000489241 SKA1Q96BD8 255 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 PTCD3Q96EY7 689 aaKnown RBP4.99□□□□□ -1.61
XRN1-213ENST00000489241 ZNF764Q96H86 408 aaPredicted RBP4.99□□□□□ -1.61
XRN1-213ENST00000489241 COQ10AQ96MF6 247 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 ADAM2Q99965 735 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 SYBUQ9NX95 663 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 PTGFRNQ9P2B2 879 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 DNMT3BQ9UBC3 853 aaKnown RBP4.99□□□□□ -1.61
XRN1-213ENST00000489241 HERC5Q9UII4 1024 aaKnown RBP4.99□□□□□ -1.61
XRN1-213ENST00000489241 DTNAQ9Y4J8 743 aa4.99□□□□□ -1.61
XRN1-213ENST00000489241 PIPSLA2A3N6 862 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 TISP43B9A030 160 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 FAM155BO75949 473 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 POLBP06746 335 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 CENPBP07199 599 aaPredicted RBP4.98□□□□□ -1.61
XRN1-213ENST00000489241 ITGA2BP08514 1039 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 FAM163BP0C2L3 166 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 ITGAMP11215 1152 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 GYS1P13807 737 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 CHRM3P20309 590 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 TNFAIP3P21580 790 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 PXNP49023 591 aaPredicted RBP4.98□□□□□ -1.61
XRN1-213ENST00000489241 LOXL3P58215 753 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 MC2RQ01718 297 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 FOXD4Q12950 439 aaPredicted RBP4.98□□□□□ -1.61
XRN1-213ENST00000489241 TUBB3Q13509 450 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 CCDC142Q17RM4 750 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 ZNF750Q32MQ0 723 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 ZIK1Q3SY52 487 aaPredicted RBP4.98□□□□□ -1.61
XRN1-213ENST00000489241 MGAT5BQ3V5L5 792 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 FAXCQ5TGI0 409 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 STRIP1Q5VSL9 837 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 MRNIPQ6NTE8 343 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 TMEM108Q6UXF1 575 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 TMPRSS9Q7Z410 1059 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 GPR149Q86SP6 731 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 ADGRG3Q86Y34 549 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 GATAD2AQ86YP4 633 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 FTSJ3Q8IY81 847 aaKnown RBP4.98□□□□□ -1.61
XRN1-213ENST00000489241 SIMC1Q8NDZ2 872 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 ASB12Q8WXK4 309 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 LINC00476Q8WZB0 136 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 OSBPL9Q96SU4 736 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 DDX23Q9BUQ8 820 aaKnown RBP4.98□□□□□ -1.61
XRN1-213ENST00000489241 PABPC3Q9H361 631 aaKnown RBP4.98□□□□□ -1.61
XRN1-213ENST00000489241 SMOC2Q9H3U7 446 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 SYNPO2LQ9H987 977 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 KIF17Q9P2E2 1029 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 IFT80Q9P2H3 777 aaPredicted RBP4.98□□□□□ -1.61
XRN1-213ENST00000489241 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.98□□□□□ -1.61
XRN1-213ENST00000489241 CDY1Q9Y6F8 540 aa4.98□□□□□ -1.61
XRN1-213ENST00000489241 FCHO1O14526 889 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 PCDH17O14917 1159 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 USP1O94782 785 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 ZFPL1O95159 310 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 HKR1P10072 659 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 EGR2P11161 476 aaPredicted RBP4.97□□□□□ -1.61
XRN1-213ENST00000489241 GATA3P23771 443 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 CNTFP26441 200 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 MST1P26927 711 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 CST5P28325 142 aaPredicted RBP4.97□□□□□ -1.61
XRN1-213ENST00000489241 CD6P30203 668 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 ADD2P35612 726 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 ZNF134P52741 427 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 POLE2P56282 527 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 LILRA4P59901 499 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 KRT17Q04695 432 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 NSUN2Q08J23 767 aaKnown RBP eCLIP4.97□□□□□ -1.61
XRN1-213ENST00000489241 G3BP1Q13283 466 aaKnown RBP eCLIP4.97□□□□□ -1.61
XRN1-213ENST00000489241 E2F2Q14209 437 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 FAM110CQ1W6H9 321 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 TRIM71Q2Q1W2 868 aaKnown RBP4.97□□□□□ -1.61
XRN1-213ENST00000489241 MANEALQ5VSG8 457 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 KLHL17Q6TDP4 642 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 MAATS1Q7Z4T9 603 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 LRRTM4Q86VH4 590 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 TMTC1Q8IUR5 882 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 HERC6Q8IVU3 1022 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 SLC30A5Q8TAD4 765 aa4.97□□□□□ -1.61
XRN1-213ENST00000489241 SMCR8Q8TEV9 937 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms