RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ENDOD1O94919 500 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 PNPLA4P41247 253 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 SLC16A1P53985 500 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 Q4G0T1 1027 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 TCHHL1Q5QJ38 904 aaPredicted RBP18.17■□□□□ 0.5
NPHP4-209ENST00000489180 CACHD1Q5VU97 1274 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 XRRA1Q6P2D8 792 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 TMC3Q7Z5M5 1100 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 NMRK2Q9NPI5 230 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 IMPAD1Q9NX62 359 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 DLC1Q96QB1 1528 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 MUTP22033 750 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 NAMPTP43490 491 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 PGS1Q32NB8 556 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 DDI1Q8WTU0 396 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 RXFP2Q8WXD0 754 aa18.17■□□□□ 0.5
NPHP4-209ENST00000489180 STAG3L1P0CL83 205 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 PRIM2P49643 509 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 SLC44A4Q53GD3 710 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 MRNIPQ6NTE8 343 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 PTPRUQ92729 1446 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 EPB42P16452 691 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 MAP3K7CLP57077 242 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 CYP51A1Q16850 503 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 SLC44A2Q8IWA5 706 aaPredicted RBP18.16■□□□□ 0.5
NPHP4-209ENST00000489180 ZNF513Q8N8E2 541 aaPredicted RBP18.16■□□□□ 0.5
NPHP4-209ENST00000489180 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.16■□□□□ 0.5
NPHP4-209ENST00000489180 AAR2Q9Y312 384 aaKnown RBP18.16■□□□□ 0.5
NPHP4-209ENST00000489180 SAC3D1A6NKF1 404 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 TM9SF1O15321 606 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 SLC25A27O95847 323 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 MAPRE1Q15691 268 aaKnown RBP18.16■□□□□ 0.5
NPHP4-209ENST00000489180 ACTL9Q8TC94 416 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 PTPRHQ9HD43 1115 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 SLC24A2Q9UI40 661 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 CSDE1O75534 798 aaKnown RBP18.16■□□□□ 0.5
NPHP4-209ENST00000489180 C3orf67Q6ZVT6 689 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 ILDR1Q86SU0 546 aaPredicted RBP18.16■□□□□ 0.5
NPHP4-209ENST00000489180 ATP6V0D2Q8N8Y2 350 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 EHD4Q9H223 541 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 HACL1Q9UJ83 578 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 CEMIPQ8WUJ3 1361 aa18.16■□□□□ 0.5
NPHP4-209ENST00000489180 C2orf81A6NN90 581 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 CEP78Q5JTW2 689 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 COLGALT1Q8NBJ5 622 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 PRCCQ92733 491 aaPredicted RBP18.15■□□□□ 0.5
NPHP4-209ENST00000489180 UBE2OQ9C0C9 1292 aaKnown RBP18.15■□□□□ 0.5
NPHP4-209ENST00000489180 PTPRMP28827 1452 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 CFAP99D6REC4 459 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 SUPT20HL2P0C7V6 817 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 CHRNB3Q05901 458 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 MMRN1Q13201 1228 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 SOX13Q9UN79 622 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 A0A0U1RQJ8 604 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 F8W810 466 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 STRNO43815 780 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 CLPTM1O96005 669 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 PAN2Q504Q3 1202 aaKnown RBP18.15■□□□□ 0.5
NPHP4-209ENST00000489180 SV2AQ7L0J3 742 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 BNIPLQ7Z465 357 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 TCP10LQ8TDR4 215 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 AP4S1Q9Y587 144 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 C1orf167Q5SNV9 1468 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 JCHAINP01591 159 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 ODC1P11926 461 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 GARTP22102 1010 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 ELK3P41970 407 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 HPCAP84074 193 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 TDRD10Q5VZ19 366 aaKnown RBP18.15■□□□□ 0.5
NPHP4-209ENST00000489180 FAR2Q96K12 515 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 POLLQ9UGP5 575 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 ZC3H11AO75152 810 aaKnown RBP eCLIP18.15■□□□□ 0.5
NPHP4-209ENST00000489180 CYP2F1P24903 491 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 N4BP2L1Q5TBK1 243 aaPredicted RBP18.15■□□□□ 0.5
NPHP4-209ENST00000489180 UGT3A1Q6NUS8 523 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 MOXD1Q6UVY6 613 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 CCNJLQ8IV13 435 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 MCOLN2Q8IZK6 566 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 IL1RAPL1Q9NZN1 696 aa18.15■□□□□ 0.5
NPHP4-209ENST00000489180 CACNA2D1P54289 1103 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 ALDH6A1Q02252 535 aaKnown RBP18.14■□□□□ 0.49
NPHP4-209ENST00000489180 TSEN2Q8NCE0 465 aaKnown RBP18.14■□□□□ 0.49
NPHP4-209ENST00000489180 GPRC5AQ8NFJ5 357 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 SEMA4DQ92854 862 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 PRMT6Q96LA8 375 aaPredicted RBP18.14■□□□□ 0.49
NPHP4-209ENST00000489180 SLITRK1Q96PX8 696 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 TLR10Q9BXR5 811 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 AK9Q5TCS8 1911 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 CYB561D2O14569 222 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 BAIAP3O94812 1187 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 TPH1P17752 444 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 SLC1A6P48664 564 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 CENPAP49450 140 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 PPATQ06203 517 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 CDH18Q13634 790 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 AGKQ53H12 422 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 ADGRF2Q8IZF7 708 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 AENQ8WTP8 325 aaKnown RBP18.14■□□□□ 0.49
NPHP4-209ENST00000489180 JADE3Q92613 823 aa18.14■□□□□ 0.49
NPHP4-209ENST00000489180 RAB21Q9UL25 225 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms