RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 PTPN11Q06124 597 aaPredicted RBP18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 ZNF554Q86TJ5 538 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 KLHL7Q8IXQ5 586 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 DNAJC9Q8WXX5 260 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 TMEM176AQ96HP8 235 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 HIC2Q96JB3 615 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 PLEKHA5Q9HAU0 1116 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 LNPEPQ9UIQ6 1025 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 TMEM247A6NEH6 219 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 CASTOR2A6NHX0 329 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 UBOX5O94941 541 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 POMCP01189 267 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 LMO2P25791 158 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 SERPINB4P48594 390 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 PTP4A2Q12974 167 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 P3H1Q32P28 736 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 CNPY1Q3B7I2 92 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 ERMARDQ5T6L9 678 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 AGBL2Q5U5Z8 902 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 GET4Q7L5D6 327 aaPredicted RBP18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 OR6B3Q8NGW1 331 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 HASPINQ8TF76 798 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 WDR60Q8WVS4 1066 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 HES6Q96HZ4 224 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 DEFB118Q96PH6 123 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 HAPLN3Q96S86 360 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 RNPEPL1Q9HAU8 725 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 NKX1-2Q9UD57 310 aaPredicted RBP18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 NR2E1Q9Y466 385 aa18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 TIMM13Q9Y5L4 95 aaPredicted RBP18.99■□□□□ 0.63
POLR2J3-205ENST00000489144 I3L4J1 428 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 M0QYV0 167 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 FGFR1P11362 822 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 PRLRP16471 622 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 CA8P35219 290 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 HSPA9P38646 679 aaKnown RBP18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 PAFAH1B1P43034 410 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 ATN1P54259 1190 aaPredicted RBP18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 SOWAHAQ2M3V2 549 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 SYCE1Q8N0S2 351 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 GSTCDQ8NEC7 633 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 XPO6Q96QU8 1125 aaKnown RBP18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 ADAM2Q99965 735 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 KLHL11Q9NVR0 708 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 ZSCAN5CA6NGD5 496 aaPredicted RBP18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 MICAL2O94851 1124 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 TCF4P15884 667 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 ATICP31939 592 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 RGS7P49802 495 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 NKX3-2P78367 333 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 LMNB2Q03252 620 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 MBTPS1Q14703 1052 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 CFAP221Q4G0U5 840 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 PTPN20Q4JDL3 420 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 RASIP1Q5U651 963 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 AGMOQ6ZNB7 445 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 LRRC43Q8N309 656 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 SLAIN1Q8ND83 568 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 RSPH1Q8WYR4 309 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 ZNF317Q96PQ6 595 aaPredicted RBP18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 UBQLN1Q9UMX0 589 aaKnown RBP18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 CHMP2BQ9UQN3 213 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 COMMD3-BMI1R4GMX3 469 aa18.98■□□□□ 0.63
POLR2J3-205ENST00000489144 F8W810 466 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 CKBP12277 381 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 GUCY2DQ02846 1103 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 MAMLD1Q13495 774 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 GALNTL6Q49A17 601 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 MCEEQ96PE7 176 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 CPXM1Q96SM3 734 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 FAM129AQ9BZQ8 928 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 CNOT10Q9H9A5 744 aaKnown RBP18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 ABCF3Q9NUQ8 709 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 SAMD15Q9P1V8 674 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 PDP2Q9P2J9 529 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 ACAT1P24752 427 aaKnown RBP18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 RABGGTBP53611 331 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 COPS2P61201 443 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 TRIM71Q2Q1W2 868 aaKnown RBP18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 STKLD1Q8NE28 680 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 UCMAQ8WVF2 138 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 IFT81Q8WYA0 676 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 ACSF2Q96CM8 615 aaPredicted RBP18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 KRT12Q99456 494 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 RALGAPA2Q2PPJ7 1873 aa18.97■□□□□ 0.63
POLR2J3-205ENST00000489144 TRIM43BA6NCK2 446 aa18.96■□□□□ 0.63
POLR2J3-205ENST00000489144 ARL5CA6NH57 179 aa18.96■□□□□ 0.63
POLR2J3-205ENST00000489144 P4HA1P13674 534 aa18.96■□□□□ 0.63
POLR2J3-205ENST00000489144 CACNA2D1P54289 1103 aa18.96■□□□□ 0.63
POLR2J3-205ENST00000489144 PSMC1P62191 440 aaKnown RBP18.96■□□□□ 0.63
POLR2J3-205ENST00000489144 ERVK-5Q9HDB9 667 aa18.96■□□□□ 0.63
POLR2J3-205ENST00000489144 FGGP02679 453 aa18.96■□□□□ 0.63
POLR2J3-205ENST00000489144 GLI1P08151 1106 aa18.96■□□□□ 0.63
POLR2J3-205ENST00000489144 CCDC130P13994 396 aa18.96■□□□□ 0.63
POLR2J3-205ENST00000489144 MMP8P22894 467 aa18.96■□□□□ 0.63
POLR2J3-205ENST00000489144 CLCNKBP51801 687 aa18.96■□□□□ 0.63
POLR2J3-205ENST00000489144 PCBP1Q15365 356 aaKnown RBP eCLIP18.96■□□□□ 0.63
POLR2J3-205ENST00000489144 PPP1R26Q5T8A7 1209 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms