RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 DCAF12L1Q5VU92 463 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 SDE2Q6IQ49 451 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 B4GALNT4Q76KP1 1039 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 SPARTQ8N0X7 666 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 ASB5Q8WWX0 329 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 PPP2R3CQ969Q6 453 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 CTHRC1Q96CG8 243 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 MTMR8Q96EF0 704 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 LMLNQ96KR4 655 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 GBA2Q9HCG7 927 aaPredicted RBP3.44□□□□□ -1.86
CCDC93-209ENST00000488908 CNNM1Q9NRU3 951 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 GJB4Q9NTQ9 266 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 DECR2Q9NUI1 292 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 ZSCAN32Q9NX65 697 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 MGAT4CQ9UBM8 478 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 FER1L4A9Z1Z3 1794 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 CLIC1O00299 241 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 ACOT8O14734 319 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 INPPL1O15357 1258 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 CTIFO43310 598 aaKnown RBP3.43□□□□□ -1.86
CCDC93-209ENST00000488908 TNFRSF8P28908 595 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 ALDH7A1P49419 539 aaKnown RBP3.43□□□□□ -1.86
CCDC93-209ENST00000488908 MTHFSP49914 203 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 SLC14A1Q13336 389 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 MFSD13AQ14CX5 517 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 PTPN21Q16825 1174 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 FAM110CQ1W6H9 321 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 PLA1AQ53H76 456 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 WIPF2Q8TF74 440 aaPredicted RBP3.43□□□□□ -1.86
CCDC93-209ENST00000488908 ATP2A3Q93084 1043 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 HIC2Q96JB3 615 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 CDK5RAP3Q96JB5 506 aa3.43□□□□□ -1.86
CCDC93-209ENST00000488908 NTPCRQ9BSD7 190 aaKnown RBP3.43□□□□□ -1.86
CCDC93-209ENST00000488908 CCDC8Q9H0W5 538 aaPredicted RBP3.43□□□□□ -1.86
CCDC93-209ENST00000488908 SPRY2O43597 315 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 FGF3P11487 239 aaPredicted RBP3.42□□□□□ -1.86
CCDC93-209ENST00000488908 EPHA3P29320 983 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 GUCY2FP51841 1108 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 PFKFB3Q16875 520 aaPredicted RBP3.42□□□□□ -1.86
CCDC93-209ENST00000488908 EARS2Q5JPH6 523 aaKnown RBP3.42□□□□□ -1.86
CCDC93-209ENST00000488908 LMBRD2Q68DH5 695 aaPredicted RBP3.42□□□□□ -1.86
CCDC93-209ENST00000488908 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 RFX8Q6ZV50 586 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 CUZD1Q86UP6 607 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 NR2C2APQ86WQ0 139 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 FBXL14Q8N1E6 418 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 SLC15A4Q8N697 577 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 CELF5Q8N6W0 485 aaKnown RBP3.42□□□□□ -1.86
CCDC93-209ENST00000488908 DNAJC5GQ8N7S2 189 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 NGDNQ8NEJ9 315 aaKnown RBP3.42□□□□□ -1.86
CCDC93-209ENST00000488908 VN1R3Q9BXE9 311 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 ARHGAP39Q9C0H5 1083 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 TMEM45AQ9NWC5 275 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 ATP8A1Q9Y2Q0 1164 aa3.42□□□□□ -1.86
CCDC93-209ENST00000488908 A0A087WWL8 130 aa3.41□□□□□ -1.86
CCDC93-209ENST00000488908 EPN2O95208 641 aa3.41□□□□□ -1.86
CCDC93-209ENST00000488908 POU2F2P09086 479 aa3.41□□□□□ -1.86
CCDC93-209ENST00000488908 TBXAS1P24557 533 aaPredicted RBP3.41□□□□□ -1.86
CCDC93-209ENST00000488908 PTCHD3Q3KNS1 767 aa3.41□□□□□ -1.86
CCDC93-209ENST00000488908 C12orf76Q8N812 135 aaPredicted RBP3.41□□□□□ -1.86
CCDC93-209ENST00000488908 SCNM1Q9BWG6 230 aa3.41□□□□□ -1.86
CCDC93-209ENST00000488908 TRIM36Q9NQ86 728 aa3.41□□□□□ -1.86
CCDC93-209ENST00000488908 CPA4Q9UI42 421 aa3.41□□□□□ -1.86
CCDC93-209ENST00000488908 TRIP12Q14669 1992 aaPredicted RBP3.41□□□□□ -1.86
CCDC93-209ENST00000488908 C2CD4BA6NLJ0 364 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 SPTLC2O15270 562 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 USP12O75317 370 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 NDUFB8O95169 186 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 RECQLP46063 649 aaPredicted RBP3.4□□□□□ -1.87
CCDC93-209ENST00000488908 KCNJ4P48050 445 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 HILS1P60008 231 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 PPATQ06203 517 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 NFATC4Q14934 902 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 FBXL22Q6P050 247 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 FAM57BQ71RH2 274 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.4□□□□□ -1.87
CCDC93-209ENST00000488908 TMPRSS12Q86WS5 348 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 COL23A1Q86Y22 540 aaPredicted RBP3.4□□□□□ -1.87
CCDC93-209ENST00000488908 SPATA2LQ8IUW3 424 aaPredicted RBP3.4□□□□□ -1.87
CCDC93-209ENST00000488908 IQCF1Q8N6M8 205 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 BCAS4Q8TDM0 211 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 TMEM255BQ8WV15 326 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 NUDCD2Q8WVJ2 157 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 JPH3Q8WXH2 748 aaPredicted RBP3.4□□□□□ -1.87
CCDC93-209ENST00000488908 RAPGEF4Q8WZA2 1011 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 MED30Q96HR3 178 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 TUBB6Q9BUF5 446 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 MS4A7Q9GZW8 240 aaPredicted RBP3.4□□□□□ -1.87
CCDC93-209ENST00000488908 MYLK2Q9H1R3 596 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 PIH1D1Q9NWS0 290 aaKnown RBP3.4□□□□□ -1.87
CCDC93-209ENST00000488908 ERRFI1Q9UJM3 462 aaPredicted RBP3.4□□□□□ -1.87
CCDC93-209ENST00000488908 COG5Q9UP83 839 aa3.4□□□□□ -1.87
CCDC93-209ENST00000488908 TMEM272A0A1B0GTI8 110 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.39□□□□□ -1.87
CCDC93-209ENST00000488908 ZNF814B7Z6K7 855 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 FYB1O15117 783 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 AKAP10O43572 662 aa3.39□□□□□ -1.87
CCDC93-209ENST00000488908 TLX3O43711 291 aaPredicted RBP3.39□□□□□ -1.87
CCDC93-209ENST00000488908 ZC3H11AO75152 810 aaKnown RBP eCLIP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms