RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 ZDHHC11BP0C7U3 371 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 GRIA2P42262 883 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 KIR2DL1P43626 348 aaPredicted RBP19.52■□□□□ 0.72
HDAC6-231ENST00000488905 STK4Q13043 487 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 ATL3Q6DD88 541 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 ACOT1Q86TX2 421 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 SLC9A9Q8IVB4 645 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 FUKQ8N0W3 1084 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 OLIG1Q8TAK6 271 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 TMEM174Q8WUU8 243 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 DUSP9Q99956 384 aaKnown RBP19.52■□□□□ 0.72
HDAC6-231ENST00000488905 COMMD8Q9NX08 183 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 CHORDC1Q9UHD1 332 aaPredicted RBP19.52■□□□□ 0.72
HDAC6-231ENST00000488905 A0A0A0MRY4 1105 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 HOXC11O43248 304 aaPredicted RBP19.51■□□□□ 0.71
HDAC6-231ENST00000488905 KCNK5O95279 499 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 HSP90AA1P07900 732 aaKnown RBP19.51■□□□□ 0.71
HDAC6-231ENST00000488905 P4HA1P13674 534 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 CCDC130P13994 396 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 TNFRSF4P43489 277 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 DLG4P78352 724 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 GAD2Q05329 585 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 ZACNQ401N2 412 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 EOGTQ5NDL2 527 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 HSCBQ8IWL3 235 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 ETFBKMTQ8IXQ9 262 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 ZMIZ2Q8NF64 920 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 WHAMMQ8TF30 809 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 CHAMP1Q96JM3 812 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 SPACA7Q96KW9 195 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 KCTD10Q9H3F6 313 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 POLMQ9NP87 494 aaPredicted RBP19.51■□□□□ 0.71
HDAC6-231ENST00000488905 HMGXB4Q9UGU5 601 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 CFAP45Q9UL16 551 aa19.51■□□□□ 0.71
HDAC6-231ENST00000488905 C4orf47A7E2U8 309 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 P2RY2P41231 377 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 DHPSP49366 369 aaPredicted RBP19.5■□□□□ 0.71
HDAC6-231ENST00000488905 SHC2P98077 582 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 ORC1Q13415 861 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 PKP1Q13835 747 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 KMT5BQ4FZB7 885 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 EMC10Q5UCC4 262 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 PSAPL1Q6NUJ1 521 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 BBS7Q8IWZ6 715 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 SLC2A14Q8TDB8 520 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 PAGE5Q96GU1 130 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 SMOQ99835 787 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 NACA2Q9H009 215 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 ZDHHC4Q9NPG8 344 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 BCCIPQ9P287 314 aaKnown RBP eCLIP19.5■□□□□ 0.71
HDAC6-231ENST00000488905 ADAMTS9Q9P2N4 1935 aa19.5■□□□□ 0.71
HDAC6-231ENST00000488905 PATE3B3GLJ2 98 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 PDXKO00764 312 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 KHNYNO15037 678 aaKnown RBP19.49■□□□□ 0.71
HDAC6-231ENST00000488905 TLR5O60602 858 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 ADAM23O75077 832 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 BEST1O76090 585 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 NR3C1P04150 777 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 IRF1P10914 325 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 ASPAP45381 313 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 NDST1P52848 882 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 DNM1Q05193 864 aaKnown RBP19.49■□□□□ 0.71
HDAC6-231ENST00000488905 SGSM1Q2NKQ1 1148 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 DAB2IPQ5VWQ8 1189 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 BTBD8Q5XKL5 378 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 HMGB4Q8WW32 186 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 RLN3Q8WXF3 142 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 TAF4BQ92750 862 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 FBXO44Q9H4M3 255 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 CSNK1G1Q9HCP0 422 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 SPHK2Q9NRA0 654 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 FAM49BQ9NUQ9 324 aa19.49■□□□□ 0.71
HDAC6-231ENST00000488905 CIZ1Q9ULV3 898 aaPredicted RBP19.49■□□□□ 0.71
HDAC6-231ENST00000488905 CHD6Q8TD26 2715 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 TCRBV21S2A2A0A5A6 115 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 TULP3O75386 442 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 ASS1P00966 412 aaKnown RBP19.48■□□□□ 0.71
HDAC6-231ENST00000488905 RPN1P04843 607 aaKnown RBP19.48■□□□□ 0.71
HDAC6-231ENST00000488905 PIK3CAP42336 1068 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 NOVA1P51513 510 aaKnown RBP19.48■□□□□ 0.71
HDAC6-231ENST00000488905 MAP3K7CLP57077 242 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 ANO4Q32M45 955 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 PREPLQ4J6C6 727 aaPredicted RBP19.48■□□□□ 0.71
HDAC6-231ENST00000488905 SPOPLQ6IQ16 392 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 LPCAT2Q7L5N7 544 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 TRMT11Q7Z4G4 463 aaKnown RBP19.48■□□□□ 0.71
HDAC6-231ENST00000488905 UNC93AQ86WB7 457 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 CRYBG2Q8N1P7 616 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 ZNF513Q8N8E2 541 aaPredicted RBP19.48■□□□□ 0.71
HDAC6-231ENST00000488905 NAT16Q8N8M0 369 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 TERB1Q8NA31 727 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 TMC2Q8TDI7 906 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 WBP2Q969T9 261 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 TMEM9BQ9NQ34 198 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 DEC1Q9P2X7 70 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 RCOR1Q9UKL0 485 aa19.48■□□□□ 0.71
HDAC6-231ENST00000488905 TBC1D3BA6NDS4 549 aa19.47■□□□□ 0.71
HDAC6-231ENST00000488905 FAM200BP0CF97 657 aa19.47■□□□□ 0.71
HDAC6-231ENST00000488905 PFKFB1P16118 471 aa19.47■□□□□ 0.71
HDAC6-231ENST00000488905 PGFP49763 221 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms