RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 ZNF276Q8N554 614 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 SLC7A6OSQ96CW6 309 aaPredicted RBP13.22□□□□□ -0.29
CLIC4-202ENST00000488683 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
CLIC4-202ENST00000488683 ZNF570Q96NI8 536 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 SMYD2Q9NRG4 433 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 SMG5Q9UPR3 1016 aaKnown RBP13.22□□□□□ -0.29
CLIC4-202ENST00000488683 CSADQ9Y600 493 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 CITO14578 2027 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 A0A0G2JLL6 359 aaPredicted RBP13.21□□□□□ -0.29
CLIC4-202ENST00000488683 APOC4-APOC2K7ER74 178 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 MCF2LO15068 1137 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 APOC2P02655 101 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 CCNB1P14635 433 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 SLC18A1P54219 525 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 SESN3P58005 492 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 ROR1Q01973 937 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 RIPK1Q13546 671 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 KRT81Q14533 505 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 KIZQ2M2Z5 673 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 TRMT10BQ6PF06 316 aaKnown RBP13.21□□□□□ -0.29
CLIC4-202ENST00000488683 ADGRD1Q6QNK2 874 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 RGS9BPQ6ZS82 235 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 PRRT2Q7Z6L0 340 aaPredicted RBP13.21□□□□□ -0.29
CLIC4-202ENST00000488683 PCGF5Q86SE9 256 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 SESTD1Q86VW0 696 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 ATP11CQ8NB49 1132 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 GRAMD1AQ96CP6 724 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 MMP19Q99542 508 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 DHRS4Q9BTZ2 278 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 ACSS3Q9H6R3 686 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 PPME1Q9Y570 386 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 LPXNO60711 386 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 ALADP13716 330 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 IL4RP24394 825 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 CCDC14Q49A88 953 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 BSPRYQ5W0U4 402 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 ZCCHC23Q6ZST2 131 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 TTC30AQ86WT1 665 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 CCDC125Q86Z20 511 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 PDIK1LQ8N165 341 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 AFG1LQ8WV93 481 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 ZMAT2Q96NC0 199 aaKnown RBP13.21□□□□□ -0.29
CLIC4-202ENST00000488683 TBC1D10AQ9BXI6 508 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 FAM49AQ9H0Q0 323 aaPredicted RBP13.21□□□□□ -0.29
CLIC4-202ENST00000488683 CDHR5Q9HBB8 845 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 PLAC1Q9HBJ0 212 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 TUBGCP4Q9UGJ1 667 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 SNX9Q9Y5X1 595 aa13.21□□□□□ -0.29
CLIC4-202ENST00000488683 DNAJC25-GNG10A0A024R161 153 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 FAM237BA0A1B0GVD1 139 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 IL18RAPO95256 599 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 NPTXRO95502 500 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 ADORA2BP29275 332 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 ELF1P32519 619 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 ADCYAP1R1P41586 468 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 GABRB2P47870 512 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 GBE1Q04446 702 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 NAA25Q14CX7 972 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 NBPF20Q3BBV1 942 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 TRIM68Q6AZZ1 485 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLIC4-202ENST00000488683 TTC13Q8NBP0 860 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.2□□□□□ -0.3
CLIC4-202ENST00000488683 FAM172AQ8WUF8 416 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 KIF12Q96FN5 646 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 PLCD4Q9BRC7 762 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 GOLGA2P5Q9HBQ8 144 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 ARL8BQ9NVJ2 186 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 KLK14Q9P0G3 267 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 SENP1Q9P0U3 644 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 MAD1L1Q9Y6D9 718 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 GPD1P21695 349 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 SERPINB3P29508 390 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 CLNS1AP54105 237 aaKnown RBP13.2□□□□□ -0.3
CLIC4-202ENST00000488683 SLC10A2Q12908 348 aaPredicted RBP13.2□□□□□ -0.3
CLIC4-202ENST00000488683 KCTD2Q14681 263 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 SETDB1Q15047 1291 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 RASA2Q15283 850 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 ALYREFQ86V81 257 aaKnown RBP13.2□□□□□ -0.3
CLIC4-202ENST00000488683 TP53INP2Q8IXH6 220 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 GPC2Q8N158 579 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 BANPQ8N9N5 519 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 FAM13CQ8NE31 585 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 FBXO27Q8NI29 283 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 PCDH19Q8TAB3 1148 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 ACAP3Q96P50 834 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 MIPEPQ99797 713 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 SMARCAD1Q9H4L7 1026 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 ETNK2Q9NVF9 386 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 WDR35Q9P2L0 1181 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 HEY2Q9UBP5 337 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 ZFP69BQ9UJL9 534 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 ZSWIM8A7E2V4 1837 aa13.2□□□□□ -0.3
CLIC4-202ENST00000488683 HBP1O60381 514 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 METTL18O95568 372 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 MT-ND3P03897 115 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 LCP1P13796 627 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 CCDC130P13994 396 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 AKAP5P24588 427 aa13.19□□□□□ -0.3
CLIC4-202ENST00000488683 SLC8A1P32418 973 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms