RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 GALK1P51570 392 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 KIF11P52732 1056 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 DMWDQ09019 674 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 ARHGAP17Q68EM7 881 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 TRIM59Q8IWR1 403 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 UBR7Q8N806 425 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 NT5C1BQ96P26 610 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 NMUR1Q9HB89 426 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 CYLDQ9NQC7 956 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 SH3BP1Q9Y3L3 701 aa18.71■□□□□ 0.59
ITGB1-215ENST00000488494 E2F8A0AVK6 867 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 K7ESF4 209 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 PMM2O15305 246 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 GNA14O95837 355 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 TBX18O95935 607 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 CD19P15391 556 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 NRLP54845 237 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 CETN1Q12798 172 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 DHCR24Q15392 516 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 GAB4Q2WGN9 574 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 SGO2Q562F6 1265 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 RIF1Q5UIP0 2472 aaKnown RBP18.7■□□□□ 0.58
ITGB1-215ENST00000488494 CCDC186Q7Z3E2 898 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 TTC30AQ86WT1 665 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 PPM1KQ8N3J5 372 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 SUMF1Q8NBK3 374 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 EZH1Q92800 747 aaPredicted RBP18.7■□□□□ 0.58
ITGB1-215ENST00000488494 HINFPQ9BQA5 517 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 SRRTQ9BXP5 876 aaKnown RBP18.7■□□□□ 0.58
ITGB1-215ENST00000488494 CLSTN2Q9H4D0 955 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 NAGPAQ9UK23 515 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 SMG5Q9UPR3 1016 aaKnown RBP18.7■□□□□ 0.58
ITGB1-215ENST00000488494 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.7■□□□□ 0.585e-6■■■■■ 39.1
ITGB1-215ENST00000488494 KIAA1549LQ6ZVL6 1849 aa18.7■□□□□ 0.58
ITGB1-215ENST00000488494 CHURC1-FNTBB4DL54 471 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 ADH1CP00326 375 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 ADH5P11766 374 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 HOXC13P31276 330 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 OPRD1P41143 372 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 FNTBP49356 437 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 BCAT1P54687 386 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 MARSP56192 900 aaKnown RBP18.69■□□□□ 0.58
ITGB1-215ENST00000488494 SLC8A3P57103 927 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 HEATR6Q6AI08 1181 aaKnown RBP18.69■□□□□ 0.58
ITGB1-215ENST00000488494 PIGZQ86VD9 579 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 BBS7Q8IWZ6 715 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 KAT5Q92993 513 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 WBP2Q969T9 261 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 EPC1Q9H2F5 836 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 TBC1D14Q9P2M4 693 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 RWDD2AQ9UIY3 292 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 TSPAN16Q9UKR8 245 aa18.69■□□□□ 0.58
ITGB1-215ENST00000488494 DMXL1Q9Y485 3027 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 MDM4O15151 490 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 P4HA2O15460 535 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 AFPP02771 609 aaKnown RBP18.68■□□□□ 0.58
ITGB1-215ENST00000488494 CCDC192P0DO97 292 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 RARGP13631 454 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 KCNH2Q12809 1159 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 FBXO43Q4G163 708 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 C10orf120Q5SQS8 335 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 TMEM270Q6UE05 265 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 SCD5Q86SK9 330 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 ARHGEF19Q8IW93 802 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 ADGRG2Q8IZP9 1017 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 ANKRD52Q8NB46 1076 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 RPLP0P6Q8NHW5 317 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 LMO3Q8TAP4 145 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 INTS2Q9H0H0 1204 aaKnown RBP18.68■□□□□ 0.58
ITGB1-215ENST00000488494 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.68■□□□□ 0.58
ITGB1-215ENST00000488494 HESX1Q9UBX0 185 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 NUDT5Q9UKK9 219 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 USP3Q9Y6I4 520 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 FAM186AA6NE01 2351 aa18.68■□□□□ 0.58
ITGB1-215ENST00000488494 TULP2O00295 520 aa18.67■□□□□ 0.58
ITGB1-215ENST00000488494 O00370 1275 aa18.67■□□□□ 0.58
ITGB1-215ENST00000488494 FGFR1OPO95684 399 aaKnown RBP18.67■□□□□ 0.58
ITGB1-215ENST00000488494 ATP5C1P36542 298 aaKnown RBP18.67■□□□□ 0.58
ITGB1-215ENST00000488494 SEC13P55735 322 aa18.67■□□□□ 0.58
ITGB1-215ENST00000488494 GOLGA8FQ08AF8 430 aa18.67■□□□□ 0.58
ITGB1-215ENST00000488494 GOLGA8DPQ0D2H9 430 aa18.67■□□□□ 0.58
ITGB1-215ENST00000488494 BST2Q10589 180 aaKnown RBP18.67■□□□□ 0.58
ITGB1-215ENST00000488494 LY6G5CQ5SRR4 150 aa18.67■□□□□ 0.58
ITGB1-215ENST00000488494 RHBDF2Q6PJF5 856 aa18.67■□□□□ 0.58
ITGB1-215ENST00000488494 RRAGAQ7L523 313 aa18.67■□□□□ 0.58
ITGB1-215ENST00000488494 C12orf40Q86WS4 652 aa18.67■□□□□ 0.58
ITGB1-215ENST00000488494 OTUB2Q96DC9 234 aa18.67■□□□□ 0.58
ITGB1-215ENST00000488494 CNOT6LQ96LI5 555 aaKnown RBP18.67■□□□□ 0.58
ITGB1-215ENST00000488494 KLF16Q9BXK1 252 aaPredicted RBP18.67■□□□□ 0.58
ITGB1-215ENST00000488494 POLR3BQ9NW08 1133 aaPredicted RBP18.67■□□□□ 0.58
ITGB1-215ENST00000488494 PCDHB4Q9Y5E5 795 aa18.67■□□□□ 0.58
ITGB1-215ENST00000488494 GPR179Q6PRD1 2367 aa18.67■□□□□ 0.58
ITGB1-215ENST00000488494 OTOGLQ3ZCN5 2332 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 XPO1O14980 1071 aaKnown RBP18.66■□□□□ 0.58
ITGB1-215ENST00000488494 ATG13O75143 517 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 VDRP11473 427 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 PSEN1P49768 467 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 KDSRQ06136 332 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 PDE4CQ08493 712 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 SRSF5Q13243 272 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms