RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 SLC12A3P55017 1021 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 CXADRP78310 365 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 TAF10Q12962 218 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 SLFN12LQ6IEE8 588 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 DBX2Q6ZNG2 339 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 CENPQQ7L2Z9 268 aaPredicted RBP9.88□□□□□ -0.83
COL17A1-207ENST00000488320 OSTM1Q86WC4 334 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 TMPRSS12Q86WS5 348 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 NT5DC4Q86YG4 428 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 ETFBKMTQ8IXQ9 262 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 ADGRF2Q8IZF7 708 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 CSGALNACT2Q8N6G5 542 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 CADM4Q8NFZ8 388 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 CACTINQ8WUQ7 758 aaKnown RBP9.88□□□□□ -0.83
COL17A1-207ENST00000488320 C8orf76Q96K31 380 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 MRGPRX1Q96LB2 322 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 CEP295NLQ96MC4 621 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 XPO6Q96QU8 1125 aaKnown RBP9.88□□□□□ -0.83
COL17A1-207ENST00000488320 PKMYT1Q99640 499 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 FOXP1Q9H334 677 aaPredicted RBP9.88□□□□□ -0.83
COL17A1-207ENST00000488320 SPHK2Q9NRA0 654 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 DNAJC17Q9NVM6 304 aaKnown RBP9.88□□□□□ -0.83
COL17A1-207ENST00000488320 WSB2Q9NYS7 404 aaPredicted RBP9.88□□□□□ -0.83
COL17A1-207ENST00000488320 KCND2Q9NZV8 630 aa9.88□□□□□ -0.83
COL17A1-207ENST00000488320 EIF2B4Q9UI10 523 aaKnown RBP9.88□□□□□ -0.83
COL17A1-207ENST00000488320 TENM4Q6N022 2769 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 TRIM66O15016 1216 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 HOXC11O43248 304 aaPredicted RBP9.87□□□□□ -0.83
COL17A1-207ENST00000488320 KALRNO60229 2985 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 TRAK2O60296 914 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 KRT18P05783 430 aaKnown RBP9.87□□□□□ -0.83
COL17A1-207ENST00000488320 PDGFRBP09619 1106 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 OXTRP30559 389 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 GRK6P43250 576 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 TRAPPC10P48553 1259 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 CSNK1EP49674 416 aaKnown RBP9.87□□□□□ -0.83
COL17A1-207ENST00000488320 PSMC1P62191 440 aaKnown RBP9.87□□□□□ -0.83
COL17A1-207ENST00000488320 BNC1Q01954 994 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 MYO1EQ12965 1108 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 DHX8Q14562 1220 aaKnown RBP9.87□□□□□ -0.83
COL17A1-207ENST00000488320 STARD3Q14849 445 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 SF3A1Q15459 793 aaKnown RBP9.87□□□□□ -0.83
COL17A1-207ENST00000488320 MAPRE1Q15691 268 aaKnown RBP9.87□□□□□ -0.83
COL17A1-207ENST00000488320 ARSHQ5FYA8 562 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 SLC39A4Q6P5W5 647 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 FAM171BQ6P995 826 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 TMEM25Q86YD3 366 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 LURAP1LQ8IV03 231 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 POMGNT1Q8WZA1 660 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 SNX19Q92543 992 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 MYLPFQ96A32 169 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 SLITRK1Q96PX8 696 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 GABRG3Q99928 467 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 SYT15Q9BQS2 421 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 MMTAG2Q9BU76 263 aaKnown RBP9.87□□□□□ -0.83
COL17A1-207ENST00000488320 ITM2CQ9NQX7 267 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 HCN2Q9UL51 889 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 CDH9Q9ULB4 789 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 ODF2LQ9ULJ1 636 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 NFE2L3Q9Y4A8 694 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 KNTC1P50748 2209 aa9.87□□□□□ -0.83
COL17A1-207ENST00000488320 MUC22E2RYF6 1773 aaPredicted RBP9.86□□□□□ -0.83
COL17A1-207ENST00000488320 METTL12A8MUP2 240 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 WASH3PC4AMC7 463 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 NEDD8-MDP1E9PL57 170 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 PYCARD-AS1I3L0S3 204 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 KCNK3O14649 394 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 OLFM2O95897 454 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 OAS1P00973 400 aaKnown RBP9.86□□□□□ -0.83
COL17A1-207ENST00000488320 IRF1P10914 325 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 ACADMP11310 421 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 LMO2P25791 158 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 ABCD1P33897 745 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 RBP5P82980 135 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 CCDC173Q0VFZ6 552 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 TEAD4Q15561 434 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 KIF19Q2TAC6 998 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 HS2ST1Q7LGA3 356 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 METTL3Q86U44 580 aaKnown RBP9.86□□□□□ -0.83
COL17A1-207ENST00000488320 BBS7Q8IWZ6 715 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 KCTD17Q8N5Z5 321 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 TOP6BLQ8N6T0 577 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 NUP58Q9BVL2 599 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 TTLL2Q9BWV7 592 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 NACA2Q9H009 215 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 PARVGQ9HBI0 331 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 GDAP2Q9NXN4 497 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 GMIPQ9P107 970 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 FTSJ1Q9UET6 329 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 CHORDC1Q9UHD1 332 aaPredicted RBP9.86□□□□□ -0.83
COL17A1-207ENST00000488320 DNMT3LQ9UJW3 386 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 SNX11Q9Y5W9 270 aa9.86□□□□□ -0.83
COL17A1-207ENST00000488320 TMEM131Q92545 1883 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 ZNF462Q96JM2 2506 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 KCNJ18B7U540 433 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 TISP43B9A030 160 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 PRRT4C9JH25 899 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 F8VP50 259 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 ERVH48-1M5A8F1 160 aa9.85□□□□□ -0.83
COL17A1-207ENST00000488320 GFRA2O00451 464 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms