RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 SNX17Q15036 470 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 FAM98BQ52LJ0 330 aaKnown RBP8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 DHRSXQ8N5I4 330 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 LENG1Q96BZ8 264 aaPredicted RBP8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 KLHL3Q9UH77 587 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 NARFQ9UHQ1 456 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 CROTQ9UKG9 612 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 ACOT9Q9Y305 439 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 MEI4A8MW99 385 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 SLC37A4O43826 429 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 TSC22D2O75157 780 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 CAPN1P07384 714 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 RARBP10826 455 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 CYP19A1P11511 503 aaPredicted RBP8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 CCDC130P13994 396 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 RASA1P20936 1047 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 NNMTP40261 264 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 CASP4P49662 377 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 C1DQ13901 141 aaKnown RBP8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 MAPK11Q15759 364 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 DCAF6Q58WW2 860 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 SRPK1Q96SB4 655 aaKnown RBP8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 KCTD14Q9BQ13 255 aaPredicted RBP8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 REXO4Q9GZR2 422 aaKnown RBP8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 A1CFQ9NQ94 594 aaKnown RBP8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 NYAP2Q9P242 653 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 PNMA3Q9UL41 463 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 PCDHA3Q9Y5H8 950 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 COL15A1P39059 1388 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 RHOBTB1O94844 696 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 IL5RAQ01344 420 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 TRAF2Q12933 501 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 ATP6AP1LQ52LC2 224 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 ZNF618Q5T7W0 954 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 BNIPLQ7Z465 357 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 NANOGNBQ7Z5D8 188 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 ZNF668Q96K58 619 aaPredicted RBP8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 SPATA33Q96N06 139 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 RMND5AQ9H871 391 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 JMJD4Q9H9V9 463 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 VTA1Q9NP79 307 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 RPS6KA4O75676 772 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 MPOP05164 745 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 MGAT5Q09328 741 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 MYBPC2Q14324 1141 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 EMC2Q15006 297 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 DGKDQ16760 1214 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 PTRHD1Q6GMV3 140 aaKnown RBP8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 MOXD1Q6UVY6 613 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 DENND5BQ6ZUT9 1274 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.52□□□□□ -1.052e-7■■■■■ 278.5
MCF2L2-212ENST00000488149 SETD9Q8NE22 299 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 PYDC1Q8WXC3 89 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 SLC5A5Q92911 643 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 APOL4Q9BPW4 351 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 TRIM8Q9BZR9 551 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 TRPC7Q9HCX4 862 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 TPRKBQ9Y3C4 175 aa8.52□□□□□ -1.05
MCF2L2-212ENST00000488149 PEX1O43933 1283 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 PROCP04070 461 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 TALDO1P37837 337 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 WASHC5Q12768 1159 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 TRIM71Q2Q1W2 868 aaKnown RBP8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 SAMD4BQ5PRF9 694 aaKnown RBP8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 UGT3A1Q6NUS8 523 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 ACTL9Q8TC94 416 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 MCRS1Q96EZ8 462 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 FOPNLQ96NB1 174 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 OLFM1Q99784 485 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 PDE2AO00408 941 aaPredicted RBP8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 AKAP3O75969 853 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 LSM8O95777 96 aaKnown RBP8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 ITGADQ13349 1161 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 MPP3Q13368 585 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 RIPK1Q13546 671 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 CLEC16AQ2KHT3 1053 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 DCAF4L1Q3SXM0 396 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 SLC22A9Q8IVM8 553 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 ARHGEF19Q8IW93 802 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 POU5F2Q8N7G0 328 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 DDX50Q9BQ39 737 aaKnown RBP8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 RUSC1Q9BVN2 902 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 SELENONQ9NZV5 590 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 AAR2Q9Y312 384 aaKnown RBP8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 NDUFB10O96000 172 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 ITGA9Q13797 1035 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 PDK3Q15120 406 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 CYP51A1Q16850 503 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 N4BP2L1Q5TBK1 243 aaPredicted RBP8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 MRNIPQ6NTE8 343 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 CDH24Q86UP0 819 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 NSMCE2Q96MF7 247 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 MXRA8Q9BRK3 442 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 C6orf62Q9GZU0 229 aaPredicted RBP8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 FAM49BQ9NUQ9 324 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 RAD54BQ9Y620 910 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 SALL3Q9BXA9 1300 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 H0YC42 278 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 VWA5AO00534 786 aa8.51□□□□□ -1.05
MCF2L2-212ENST00000488149 OPLAHO14841 1288 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms