RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 TTBK1Q5TCY1 1321 aaPredicted RBP2.83□□□□□ -1.96
USP9X-208ENST00000487625 ERC2O15083 957 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 SPTLC2O15270 562 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 UNC5CO95185 931 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 SYF2O95926 243 aaKnown RBP2.82□□□□□ -1.96
USP9X-208ENST00000487625 ATXN1LP0C7T5 689 aaKnown RBP2.82□□□□□ -1.96
USP9X-208ENST00000487625 VEGFCP49767 419 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 THEMIS2Q5TEJ8 643 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 SFRP4Q6FHJ7 346 aaPredicted RBP2.82□□□□□ -1.96
USP9X-208ENST00000487625 RGS7BPQ6MZT1 257 aaPredicted RBP2.82□□□□□ -1.96
USP9X-208ENST00000487625 ZNF449Q6P9G9 518 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 B4GALNT4Q76KP1 1039 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 RTL10Q7L3V2 364 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 BCDIN3DQ7Z5W3 292 aaKnown RBP2.82□□□□□ -1.96
USP9X-208ENST00000487625 CATIPQ7Z7H3 387 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 LIX1LQ8IVB5 337 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 SFTPA1Q8IWL2 248 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 PCSK9Q8NBP7 692 aaKnown RBP2.82□□□□□ -1.96
USP9X-208ENST00000487625 SMAD5Q99717 465 aaKnown RBP2.82□□□□□ -1.96
USP9X-208ENST00000487625 PTDSS2Q9BVG9 487 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 GLOD4Q9HC38 313 aa2.82□□□□□ -1.96
USP9X-208ENST00000487625 A1L4Q6 167 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 BTBD19C9JJ37 291 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 DTNBO60941 627 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 PXNP49023 591 aaPredicted RBP2.81□□□□□ -1.96
USP9X-208ENST00000487625 TPTEP56180 551 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 DSCR9P59020 149 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 NKX6-1P78426 367 aaPredicted RBP2.81□□□□□ -1.96
USP9X-208ENST00000487625 AMPD3Q01432 767 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 PLS1Q14651 629 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 IQCB1Q15051 598 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 TBC1D25Q3MII6 688 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 ODF3L2Q3SX64 289 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 EMC10Q5UCC4 262 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 LAYNQ6UX15 382 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 USP45Q70EL2 814 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 DAAM2Q86T65 1068 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 FAM167AQ96KS9 214 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 ASPSCR1Q9BZE9 553 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 PNPOQ9NVS9 261 aa2.81□□□□□ -1.96
USP9X-208ENST00000487625 NDRG4Q9ULP0 352 aaKnown RBP2.81□□□□□ -1.96
USP9X-208ENST00000487625 WASHC2CQ9Y4E1 1318 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 PRR23AA6NEV1 266 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 H3BUI4 141 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 hCG_1984214I3L0E3 225 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 CTIFO43310 598 aaKnown RBP2.8□□□□□ -1.96
USP9X-208ENST00000487625 IGSF3O75054 1194 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 GCATO75600 419 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 EPN2O95208 641 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 CSF1RP07333 972 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 GRPP07492 148 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 POU2F2P09086 479 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 SOX8P57073 446 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 CYP1B1Q16678 543 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 ZNF750Q32MQ0 723 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 RFX8Q6ZV50 586 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 MYPOPQ86VE0 399 aaPredicted RBP2.8□□□□□ -1.96
USP9X-208ENST00000487625 CTCFLQ8NI51 663 aaPredicted RBP2.8□□□□□ -1.96
USP9X-208ENST00000487625 XAGE5Q8WWM1 108 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 SOCS4Q8WXH5 440 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 TUBB6Q9BUF5 446 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 GTPBP4Q9BZE4 634 aaKnown RBP2.8□□□□□ -1.96
USP9X-208ENST00000487625 CCNL1Q9UK58 526 aaPredicted RBP2.8□□□□□ -1.96
USP9X-208ENST00000487625 GABRQQ9UN88 632 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 MRPS17Q9Y2R5 130 aaKnown RBP2.8□□□□□ -1.96
USP9X-208ENST00000487625 PCDHGB1Q9Y5G3 927 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 SMAD5-AS1Q9Y6J3 95 aa2.8□□□□□ -1.96
USP9X-208ENST00000487625 SRRM3A6NNA2 597 aaPredicted RBP2.79□□□□□ -1.96
USP9X-208ENST00000487625 PODXLO00592 558 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 VNN1O95497 513 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 ACAA1P09110 424 aaPredicted RBP2.79□□□□□ -1.96
USP9X-208ENST00000487625 HMGB1P09429 215 aaKnown RBP2.79□□□□□ -1.96
USP9X-208ENST00000487625 CCND1P24385 295 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 ADORA2AP29274 412 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 VIPR2P41587 438 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 RECQLP46063 649 aaPredicted RBP2.79□□□□□ -1.96
USP9X-208ENST00000487625 P2RX3P56373 397 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 B4GALNT1Q00973 533 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 PPATQ06203 517 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 E2F2Q14209 437 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 PGS1Q32NB8 556 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 ZIK1Q3SY52 487 aaPredicted RBP2.79□□□□□ -1.96
USP9X-208ENST00000487625 TMEM240Q5SV17 173 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 DEPDC1Q5TB30 811 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 DPY19L3Q6ZPD9 716 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 COL23A1Q86Y22 540 aaPredicted RBP2.79□□□□□ -1.96
USP9X-208ENST00000487625 ZNF280BQ86YH2 543 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 BRIX1Q8TDN6 353 aaKnown RBP2.79□□□□□ -1.96
USP9X-208ENST00000487625 SLC35A4Q96G79 324 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 CXorf36Q9H7Y0 433 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 XPR1Q9UBH6 696 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 PCDHA6Q9UN73 950 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 PLEKHM1Q9Y4G2 1056 aa2.79□□□□□ -1.96
USP9X-208ENST00000487625 IGKV3D-20A0A0C4DH25 116 aa2.78□□□□□ -1.96
USP9X-208ENST00000487625 ALG1L2C9J202 215 aa2.78□□□□□ -1.96
USP9X-208ENST00000487625 SP1P08047 785 aa2.78□□□□□ -1.96
USP9X-208ENST00000487625 GM2AP17900 193 aa2.78□□□□□ -1.96
USP9X-208ENST00000487625 PDE6CP51160 858 aa2.78□□□□□ -1.96
USP9X-208ENST00000487625 EGR4Q05215 589 aa2.78□□□□□ -1.96
USP9X-208ENST00000487625 MYO1EQ12965 1108 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms