RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 NRCAMQ92823 1304 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 SDR42E2A6NKP2 422 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 GPR182O15218 404 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 FBXO21O94952 628 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 PRAMEP78395 509 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 OVGP1Q12889 678 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 PTP4A2Q12974 167 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 ART3Q13508 389 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 PRUNE1Q86TP1 453 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 OR6P1Q8NGX9 317 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 SLC2A14Q8TDB8 520 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 N4BP2L2Q92802 583 aaPredicted RBP12.25□□□□□ -0.45
TRA2B-214ENST00000487615 LHX5Q9H2C1 402 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 RPS6KL1Q9Y6S9 549 aa12.25□□□□□ -0.45
TRA2B-214ENST00000487615 TM9SF1O15321 606 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 MAP3K7O43318 606 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 UBOX5O94941 541 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 LHX1P48742 406 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 DPYSL3Q14195 570 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 C4orf50Q6ZRC1 276 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 C12orf50Q8NA57 414 aaPredicted RBP12.24□□□□□ -0.45
TRA2B-214ENST00000487615 MTBPQ96DY7 904 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 IFT43Q96FT9 208 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 TRIM33Q9UPN9 1127 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 MYH11P35749 1972 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 KBTBD13C9JR72 458 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 SHOX2O60902 331 aaPredicted RBP12.24□□□□□ -0.45
TRA2B-214ENST00000487615 ABHD2P08910 425 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 GHRP10912 638 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 HOXD10P28358 340 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 PEX5P50542 639 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 YWHAZP63104 245 aaKnown RBP12.24□□□□□ -0.45
TRA2B-214ENST00000487615 POU5F1BQ06416 359 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 ADIGQ0VDE8 80 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 ANKRD20A8PQ5CZ79 823 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 NAPEPLDQ6IQ20 393 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 TAF2Q6P1X5 1199 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 NLRP9Q7RTR0 991 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 GSDMBQ8TAX9 411 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 EPS15L1Q9UBC2 864 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 LOC102724159A0A0B4J2E5 919 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 CCDC78A2IDD5 438 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 PIGRP01833 764 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 THPOP40225 353 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 PSEN2P49810 448 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 TKTL1P51854 596 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 MAP3K7CLP57077 242 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 PWP2Q15269 919 aaKnown RBP12.24□□□□□ -0.45
TRA2B-214ENST00000487615 CHI3L2Q15782 390 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 DBN1Q16643 649 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 SH3D19Q5HYK7 790 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 MDH1BQ5I0G3 518 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 C1orf146Q5VVC0 180 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 FAM183BPQ6ZVS7 135 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 PPHLN1Q8NEY8 458 aaKnown RBP12.24□□□□□ -0.45
TRA2B-214ENST00000487615 DDX27Q96GQ7 796 aaKnown RBP12.24□□□□□ -0.45
TRA2B-214ENST00000487615 PWWP2AQ96N64 755 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 FIZ1Q96SL8 496 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 CATSPERBQ9H7T0 1116 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 HES2Q9Y543 173 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 ACTL7BQ9Y614 415 aa12.24□□□□□ -0.45
TRA2B-214ENST00000487615 ACAT1P24752 427 aaKnown RBP12.23□□□□□ -0.45
TRA2B-214ENST00000487615 EPHB1P54762 984 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 ANO4Q32M45 955 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 SLC39A4Q6P5W5 647 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 EXOC3L1Q86VI1 746 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 ARID3BQ8IVW6 561 aaPredicted RBP12.23□□□□□ -0.45
TRA2B-214ENST00000487615 JOSD2Q8TAC2 188 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 ZNF516Q92618 1163 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 Q9H521 79 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 GGA2Q9UJY4 613 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 CFLARO15519 480 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 ELF1P32519 619 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 MMP13P45452 471 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 NR2C2P49116 596 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 YTHDF3Q7Z739 585 aaKnown RBP12.23□□□□□ -0.45
TRA2B-214ENST00000487615 NLGN2Q8NFZ4 835 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 PPTC7Q8NI37 304 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.23□□□□□ -0.451e-6■■■■□ 24.5
TRA2B-214ENST00000487615 SYT15Q9BQS2 421 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 C20orf96Q9NUD7 363 aaPredicted RBP12.23□□□□□ -0.45
TRA2B-214ENST00000487615 DDX43Q9NXZ2 648 aaKnown RBP12.23□□□□□ -0.45
TRA2B-214ENST00000487615 LTBP4Q8N2S1 1624 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 TADA2AO75478 443 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 TOMM70O94826 608 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 TRUB2O95900 331 aaKnown RBP12.23□□□□□ -0.45
TRA2B-214ENST00000487615 RBL1P28749 1068 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 RPL22P35268 128 aaKnown RBP12.23□□□□□ -0.45
TRA2B-214ENST00000487615 PTGIRP43119 386 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 ALDH18A1P54886 795 aaKnown RBP12.23□□□□□ -0.45
TRA2B-214ENST00000487615 SP2Q02086 613 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 KDSRQ06136 332 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 FASTKD1Q53R41 847 aaKnown RBP12.23□□□□□ -0.45
TRA2B-214ENST00000487615 KCNV2Q8TDN2 545 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 GBP5Q96PP8 586 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 TRIM56Q9BRZ2 755 aaKnown RBP12.23□□□□□ -0.45
TRA2B-214ENST00000487615 RNPEPQ9H4A4 650 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 GTSE1Q9NYZ3 720 aa12.23□□□□□ -0.45
TRA2B-214ENST00000487615 BCORQ6W2J9 1755 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms