RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 SCUBE3Q8IX30 993 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 TTC16Q8NEE8 873 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 SLC30A5Q8TAD4 765 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 ZSCAN18Q8TBC5 510 aaPredicted RBP13.4□□□□□ -0.26
PRDM2-208ENST00000487453 NDRG1Q92597 394 aaKnown RBP13.4□□□□□ -0.26
PRDM2-208ENST00000487453 FAM149B1Q96BN6 582 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 PCDHB18PQ96TA0 734 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 C11orf70Q9BRQ4 267 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 SYT11Q9BT88 431 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 DEF6Q9H4E7 631 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 TASP1Q9H6P5 420 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 NMUR1Q9HB89 426 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 CYLDQ9NQC7 956 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 USTQ9Y2C2 406 aa13.4□□□□□ -0.26
PRDM2-208ENST00000487453 ANAPC1Q9H1A4 1944 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 YJEFN3A6XGL0 299 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 E7ENQ6 273 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 PAPSS1O43252 624 aaPredicted RBP13.39□□□□□ -0.27
PRDM2-208ENST00000487453 SART1O43290 800 aaKnown RBP13.39□□□□□ -0.27
PRDM2-208ENST00000487453 TLR5O60602 858 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 UNGP13051 313 aaPredicted RBP13.39□□□□□ -0.27
PRDM2-208ENST00000487453 LAMP2P13473 410 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 HNRNPH3P31942 346 aaKnown RBP13.39□□□□□ -0.27
PRDM2-208ENST00000487453 PGFP49763 221 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 PSEN1P49768 467 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 MRE11P49959 708 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 CENPCQ03188 943 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 GSE1Q14687 1217 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 ARID5BQ14865 1188 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 BTBD8Q5XKL5 378 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 PM20D1Q6GTS8 502 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 OR6B2Q6IFH4 312 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 MMS22LQ6ZRQ5 1243 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 TOGARAM2Q6ZUX3 1019 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 FAM183BPQ6ZVS7 135 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 RSRC2Q7L4I2 434 aaKnown RBP13.39□□□□□ -0.27
PRDM2-208ENST00000487453 SCD5Q86SK9 330 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 TMEM110Q86TL2 294 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 ARL14EPQ8N8R7 260 aaPredicted RBP13.39□□□□□ -0.27
PRDM2-208ENST00000487453 TC2NQ8N9U0 490 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 ST13P5Q8NFI4 369 aaPredicted RBP13.39□□□□□ -0.27
PRDM2-208ENST00000487453 IRGQQ8WZA9 623 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 ANP32BQ92688 251 aaKnown RBP13.39□□□□□ -0.27
PRDM2-208ENST00000487453 ZSWIM3Q96MP5 696 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 SMG9Q9H0W8 520 aaKnown RBP13.39□□□□□ -0.27
PRDM2-208ENST00000487453 CCSER2Q9H7U1 834 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 OSER1Q9NX31 292 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 GDE1Q9NZC3 331 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 ARHGAP20Q9P2F6 1191 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 PRKAG3Q9UGI9 489 aa13.39□□□□□ -0.27
PRDM2-208ENST00000487453 ZFP37Q9Y6Q3 630 aaPredicted RBP13.39□□□□□ -0.27
PRDM2-208ENST00000487453 GOLGA8SH3BPF8 625 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 DDX3XO00571 662 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRDM2-208ENST00000487453 COCHO43405 550 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 OAS1P00973 400 aaKnown RBP13.38□□□□□ -0.27
PRDM2-208ENST00000487453 LTFP02788 710 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 ZDHHC11BP0C7U3 371 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 RALAP11233 206 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 BMP1P13497 986 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 RARGP13631 454 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 HDCP19113 662 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 MMP8P22894 467 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 RPL34P49207 117 aaKnown RBP13.38□□□□□ -0.27
PRDM2-208ENST00000487453 TUBP50607 506 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 ZP2Q05996 745 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 TJAP1Q5JTD0 557 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 FAM78AQ5JUQ0 283 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 C10orf120Q5SQS8 335 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 HECTD3Q5T447 861 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 FAM102AQ5T9C2 384 aaPredicted RBP13.38□□□□□ -0.27
PRDM2-208ENST00000487453 WDR59Q6PJI9 974 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 BHLHA9Q7RTU4 235 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 CMTM8Q8IZV2 173 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 SCML4Q8N228 414 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 PLCD3Q8N3E9 789 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 OLIG1Q8TAK6 271 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 RNF139Q8WU17 664 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 EDEM1Q92611 657 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 C18orf8Q96DM3 657 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 PIWIL1Q96J94 861 aaKnown RBP13.38□□□□□ -0.27
PRDM2-208ENST00000487453 SLC22A12Q96S37 553 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 SLC46A2Q9BY10 475 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 CLIC5Q9NZA1 410 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 IMPACTQ9P2X3 320 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 ADAMTS1Q9UHI8 967 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 ZMYM5Q9UJ78 669 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 RASAL2Q9UJF2 1139 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 NUDT5Q9UKK9 219 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 DOCK6Q96HP0 2047 aa13.38□□□□□ -0.27
PRDM2-208ENST00000487453 C5orf42Q9H799 3197 aa13.37□□□□□ -0.27
PRDM2-208ENST00000487453 DPYSL4O14531 572 aa13.37□□□□□ -0.27
PRDM2-208ENST00000487453 CAPN9O14815 690 aa13.37□□□□□ -0.27
PRDM2-208ENST00000487453 PRAMEF12O95522 483 aa13.37□□□□□ -0.27
PRDM2-208ENST00000487453 MBL2P11226 248 aaPredicted RBP13.37□□□□□ -0.27
PRDM2-208ENST00000487453 EIF4A3P38919 411 aaKnown RBP13.37□□□□□ -0.27
PRDM2-208ENST00000487453 SNX30Q5VWJ9 437 aa13.37□□□□□ -0.27
PRDM2-208ENST00000487453 BSPRYQ5W0U4 402 aa13.37□□□□□ -0.27
PRDM2-208ENST00000487453 ACAD10Q6JQN1 1059 aa13.37□□□□□ -0.27
PRDM2-208ENST00000487453 PPP1R2P3Q6NXS1 205 aa13.37□□□□□ -0.27
PRDM2-208ENST00000487453 POTEHQ6S545 545 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms