RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ALDH1A2O94788 518 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 EPN2O95208 641 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 KAT7O95251 611 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 SMC2O95347 1197 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 IRF1P10914 325 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 EIF2DP41214 584 aaKnown RBP13.15□□□□□ -0.3
SREBF1-215ENST00000487401 TNFRSF4P43489 277 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 GOLGA8FQ08AF8 430 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 GOLGA8DPQ0D2H9 430 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 EDRF1Q3B7T1 1238 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 PREPLQ4J6C6 727 aaPredicted RBP13.15□□□□□ -0.3
SREBF1-215ENST00000487401 AASDHQ4L235 1098 aaPredicted RBP13.15□□□□□ -0.3
SREBF1-215ENST00000487401 USP39Q53GS9 565 aaKnown RBP13.15□□□□□ -0.3
SREBF1-215ENST00000487401 LY6G5CQ5SRR4 150 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 NUDT18Q6ZVK8 323 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 TTC30AQ86WT1 665 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 SMYD4Q8IYR2 804 aaPredicted RBP13.15□□□□□ -0.3
SREBF1-215ENST00000487401 TTC39CQ8N584 583 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 ZC3H10Q96K80 434 aaKnown RBP13.15□□□□□ -0.3
SREBF1-215ENST00000487401 ZFRQ96KR1 1074 aaKnown RBP13.15□□□□□ -0.3
SREBF1-215ENST00000487401 HEXIM2Q96MH2 286 aaKnown RBP13.15□□□□□ -0.3
SREBF1-215ENST00000487401 TWNKQ96RR1 684 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 TSG101Q99816 390 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 SCML2Q9UQR0 700 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 PCDHGA5Q9Y5G8 931 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 MIA3Q5JRA6 1907 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 TICRRQ7Z2Z1 1910 aa13.15□□□□□ -0.3
SREBF1-215ENST00000487401 ANK1P16157 1881 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 TBC1D3BA6NDS4 549 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 SLC30A4O14863 429 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 DCLK1O15075 740 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 CILPO75339 1184 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 TBX18O95935 607 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 ZNF806P0C7X5 589 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 ACO1P21399 889 aaKnown RBP13.14□□□□□ -0.31
SREBF1-215ENST00000487401 TIE1P35590 1138 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 ATP5C1P36542 298 aaKnown RBP13.14□□□□□ -0.31
SREBF1-215ENST00000487401 KDSRQ06136 332 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 PNOCQ13519 176 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 CCDC6Q16204 474 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 ANO4Q32M45 955 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 PLK5Q496M5 336 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 ZCWPW2Q504Y3 356 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 ANO7Q6IWH7 933 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 C11orf74Q86VG3 221 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 BBS7Q8IWZ6 715 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 NAT16Q8N8M0 369 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 EEF2KMTQ96G04 330 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 DEC1Q9P2X7 70 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 HOOK1Q9UJC3 728 aaKnown RBP13.14□□□□□ -0.31
SREBF1-215ENST00000487401 LSM7Q9UK45 103 aaKnown RBP13.14□□□□□ -0.31
SREBF1-215ENST00000487401 MMP17Q9ULZ9 603 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 PCDHA5Q9Y5H7 936 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 DMXL1Q9Y485 3027 aa13.14□□□□□ -0.31
SREBF1-215ENST00000487401 A0A0A0MRY4 1105 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 A0A1W2PQH9 124 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 CYP26A1O43174 497 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 HOXC11O43248 304 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-215ENST00000487401 GDF9O60383 454 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 KLF8O95600 359 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-215ENST00000487401 RARGP13631 454 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 GBP1P32455 592 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 PGFP49763 221 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 MXI1P50539 228 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 NUCB2P80303 420 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 SF3A2Q15428 464 aaKnown RBP13.13□□□□□ -0.31
SREBF1-215ENST00000487401 CRY1Q16526 586 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 HSF5Q4G112 596 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-215ENST00000487401 ZNF394Q53GI3 561 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 EOGTQ5NDL2 527 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 IL31Q6EBC2 164 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 CLEC20AQ6ZU45 233 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 HTR3DQ70Z44 454 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 GPRIN1Q7Z2K8 1008 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 TADA2BQ86TJ2 420 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 C12orf40Q86WS4 652 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 TMEM25Q86YD3 366 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 FMR1NBQ8N0W7 255 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-215ENST00000487401 ALLCQ8N6M5 410 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 TXNDC5Q8NBS9 432 aaKnown RBP13.13□□□□□ -0.31
SREBF1-215ENST00000487401 FBXL13Q8NEE6 735 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 WHAMMQ8TF30 809 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 FAXDC2Q96IV6 333 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 DUSP9Q99956 384 aaKnown RBP13.13□□□□□ -0.31
SREBF1-215ENST00000487401 KLF16Q9BXK1 252 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-215ENST00000487401 DUSP16Q9BY84 665 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 GTPBP4Q9BZE4 634 aaKnown RBP13.13□□□□□ -0.31
SREBF1-215ENST00000487401 DUSP15Q9H1R2 295 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-215ENST00000487401 PNPLA8Q9NP80 782 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 POLMQ9NP87 494 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-215ENST00000487401 SPHK2Q9NRA0 654 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 VPS45Q9NRW7 570 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 RAB20Q9NX57 234 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-215ENST00000487401 INVSQ9Y283 1065 aa13.13□□□□□ -0.31
SREBF1-215ENST00000487401 PATJQ8NI35 1801 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 HHLA1C9JL84 531 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 RALAP11233 206 aa13.12□□□□□ -0.31
SREBF1-215ENST00000487401 MPLP40238 635 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms