RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 KDELR1P24390 212 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 RBL1P28749 1068 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 ADORA2AP29274 412 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 OLIG2Q13516 323 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 LBRQ14739 615 aaKnown RBP12.88□□□□□ -0.35
HSPG2-211ENST00000486901 PPM1JQ5JR12 505 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 RNF111Q6ZNA4 994 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 MFN1Q8IWA4 741 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 TMEM35BQ8NCS4 154 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 OXCT2Q9BYC2 517 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-211ENST00000486901 CYP26B1Q9NR63 512 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 TBC1D22BQ9NU19 505 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 PNPOQ9NVS9 261 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 ZNF70Q9UC06 446 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-211ENST00000486901 APPL1Q9UKG1 709 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 SYNJ2BP-COX16A0A087WUM0 186 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 E7ENQ6 273 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 NEMP1O14524 444 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 NR3C2P08235 984 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 ETV4P43268 484 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 MRPS5P82675 430 aaKnown RBP12.87□□□□□ -0.35
HSPG2-211ENST00000486901 FAM219BQ5XKK7 198 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 IL31Q6EBC2 164 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 IYDQ6PHW0 289 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.87□□□□□ -0.355e-9■■■■□ 19.9
HSPG2-211ENST00000486901 PHF13Q86YI8 300 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-211ENST00000486901 NDNQ99608 321 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 IFT122Q9HBG6 1241 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 COX16Q9P0S2 106 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 CAPN8A6NHC0 703 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 PLSCR1O15162 318 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 PEX1O43933 1283 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 GRIA2P42262 883 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 OCRLQ01968 901 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 FAM102AQ5T9C2 384 aaPredicted RBP12.87□□□□□ -0.35
HSPG2-211ENST00000486901 RNPEPQ9H4A4 650 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 TLE6Q9H808 572 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 ADAMTS6Q9UKP5 1117 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 CNTNAP2Q9UHC6 1331 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 E9PBE3 544 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 KLHL41O60662 606 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 ITGAVP06756 1048 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 EMC2Q15006 297 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 TRIM50Q86XT4 487 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 CRLF3Q8IUI8 442 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 TMEM192Q8IY95 271 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 GALNT4Q8N4A0 578 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 FBXL18Q96ME1 805 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 PLA2G4CQ9UP65 541 aa12.87□□□□□ -0.35
HSPG2-211ENST00000486901 ALDH1B1P30837 517 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 ATXN1P54253 815 aaKnown RBP12.86□□□□□ -0.35
HSPG2-211ENST00000486901 SESN2P58004 480 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-211ENST00000486901 C1QBPQ07021 282 aaKnown RBP12.86□□□□□ -0.35
HSPG2-211ENST00000486901 ACAP1Q15027 740 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 CIAPIN1Q6FI81 312 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 TNS4Q8IZW8 715 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 ANGPTL2Q9UKU9 493 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 HEMK1Q9Y5R4 338 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-211ENST00000486901 TM9SF1O15321 606 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 HSD17B4P51659 736 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 ACTR2P61160 394 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 AP2B1P63010 937 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 ROR1Q01973 937 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 TTLL12Q14166 644 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-211ENST00000486901 VPS72Q15906 364 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 DPY19L2Q6NUT2 758 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 TMPRSS6Q8IU80 811 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 RELL1Q8IUW5 271 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 DEFB107AQ8IZN7 70 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 SNRNP27Q8WVK2 155 aaKnown RBP12.86□□□□□ -0.35
HSPG2-211ENST00000486901 MARK4Q96L34 752 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 TWNKQ96RR1 684 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 PEBP4Q96S96 227 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 PXMP2Q9NR77 195 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 RNF146Q9NTX7 359 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 STRIP2Q9ULQ0 834 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 AFG3L2Q9Y4W6 797 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 HNRNPRO43390 633 aaKnown RBP12.86□□□□□ -0.35
HSPG2-211ENST00000486901 ERBB2P04626 1255 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 SP2Q02086 613 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 MMEL1Q495T6 779 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 ATG14Q6ZNE5 492 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 C15orf39Q6ZRI6 1047 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 ENOSF1Q7L5Y1 443 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 ABTB1Q969K4 478 aaPredicted RBP12.86□□□□□ -0.35
HSPG2-211ENST00000486901 AKT1S1Q96B36 256 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 FEM1BQ9UK73 627 aa12.86□□□□□ -0.35
HSPG2-211ENST00000486901 KLHL33A6NCF5 533 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 HMGCRP04035 888 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 HIC1Q14526 733 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 PSMD6Q15008 389 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 ZBTB46Q86UZ6 589 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 GDPD5Q8WTR4 605 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 TRAPPC12Q8WVT3 735 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 SLC44A1Q8WWI5 657 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 NKD2Q969F2 451 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-211ENST00000486901 LPIN3Q9BQK8 851 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 C3orf70A6NLC5 250 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-211ENST00000486901 AIM2O14862 343 aa12.85□□□□□ -0.35
HSPG2-211ENST00000486901 DCXO43602 365 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms