RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 RTN4Q9NQC3 1192 aaKnown RBP13.86□□□□□ -0.19
SF1-216ENST00000486867 CNGB3Q9NQW8 809 aa13.86□□□□□ -0.19
SF1-216ENST00000486867 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.86□□□□□ -0.19
SF1-216ENST00000486867 A0A1B0GTH6 734 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 F8VZ95 297 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 M0QYV0 167 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 PES1O00541 588 aaKnown RBP13.85□□□□□ -0.19
SF1-216ENST00000486867 ZNF263O14978 683 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 EPHB6O15197 1021 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 TLR5O60602 858 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 ZBED1O96006 694 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 PDGFBP01127 241 aaPredicted RBP13.85□□□□□ -0.19
SF1-216ENST00000486867 CDK11BP21127 795 aaKnown RBP13.85□□□□□ -0.19
SF1-216ENST00000486867 CLCN5P51795 746 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 TKTL1P51854 596 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 IFRD2Q12894 506 aaPredicted RBP13.85□□□□□ -0.19
SF1-216ENST00000486867 SYCP1Q15431 976 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 MLF2Q15773 248 aaPredicted RBP13.85□□□□□ -0.19
SF1-216ENST00000486867 SLC44A4Q53GD3 710 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 CWF19L1Q69YN2 538 aaKnown RBP13.85□□□□□ -0.19
SF1-216ENST00000486867 PMF1Q6P1K2 205 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 DDX42Q86XP3 938 aaKnown RBP eCLIP13.85□□□□□ -0.19
SF1-216ENST00000486867 SIX5Q8N196 739 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 ZNF687Q8N1G0 1237 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 ARHGAP18Q8N392 663 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 UBA3Q8TBC4 463 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 IRGQQ8WZA9 623 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 SECISBP2LQ93073 1101 aaKnown RBP13.85□□□□□ -0.19
SF1-216ENST00000486867 PBXIP1Q96AQ6 731 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 MSANTD3Q96H12 275 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 SHDQ96IW2 340 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 SLC4A5Q9BY07 1137 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 LHX5Q9H2C1 402 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 CCSER2Q9H7U1 834 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 ACP6Q9NPH0 428 aa13.85□□□□□ -0.19
SF1-216ENST00000486867 MYO18AQ92614 2054 aaKnown RBP13.85□□□□□ -0.19
SF1-216ENST00000486867 A0A1W2PQH9 124 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 CDH5P33151 784 aaPredicted RBP13.84□□□□□ -0.19
SF1-216ENST00000486867 KLK7P49862 253 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 BPIFB4P59827 614 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 PTK2Q05397 1052 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 MTF1Q14872 753 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 DENND1BQ6P3S1 775 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 GPIHBP1Q8IV16 184 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 YAF2Q8IY57 180 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 SH3RF2Q8TEC5 729 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 DDX1Q92499 740 aaKnown RBP13.84□□□□□ -0.19
SF1-216ENST00000486867 CDK5RAP1Q96SZ6 601 aaKnown RBP13.84□□□□□ -0.19
SF1-216ENST00000486867 OSBPL6Q9BZF3 934 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 ULBP1Q9BZM6 244 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 HPS4Q9NQG7 708 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 THG1LQ9NWX6 298 aaKnown RBP13.84□□□□□ -0.19
SF1-216ENST00000486867 FBXL21Q9UKT6 434 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 CPQQ9Y646 472 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 ATG2BQ96BY7 2078 aa13.84□□□□□ -0.19
SF1-216ENST00000486867 A0A1W2PQC6 194 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 E2F8A0AVK6 867 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 LEFTY2O00292 366 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 THAP12O43422 761 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 GREM1O60565 184 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 PNMA6AP0CW24 399 aaPredicted RBP13.83□□□□□ -0.2
SF1-216ENST00000486867 AOC1P19801 751 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 DAOAP59103 153 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 UBXN1Q04323 297 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 ADIGQ0VDE8 80 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 PDGFRLQ15198 375 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 ASTLQ6HA08 431 aaPredicted RBP13.83□□□□□ -0.2
SF1-216ENST00000486867 C1orf228Q6PIY5 440 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 BEND5Q7L4P6 421 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 TMEM110Q86TL2 294 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 LUZP1Q86V48 1076 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 SLC47A2Q86VL8 602 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 WDTC1Q8N5D0 677 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 OSCP1Q8WVF1 389 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 KLF16Q9BXK1 252 aaPredicted RBP13.83□□□□□ -0.2
SF1-216ENST00000486867 C8orf33Q9H7E9 229 aaPredicted RBP13.83□□□□□ -0.2
SF1-216ENST00000486867 TBC1D17Q9HA65 648 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 LRRC4Q9HBW1 653 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 HEBP1Q9NRV9 189 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 GKN1Q9NS71 199 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 FAM207AQ9NSI2 230 aaPredicted RBP13.83□□□□□ -0.2
SF1-216ENST00000486867 CYTH4Q9UIA0 394 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 CA14Q9ULX7 337 aa13.83□□□□□ -0.2
SF1-216ENST00000486867 TEX33O43247 280 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 FBXO21O94952 628 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 ABL1P00519 1130 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 MBL2P11226 248 aaPredicted RBP13.82□□□□□ -0.2
SF1-216ENST00000486867 RARGP13631 454 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 ATP5C1P36542 298 aaKnown RBP13.82□□□□□ -0.2
SF1-216ENST00000486867 USP8P40818 1118 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 ACADSBP45954 432 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 NUBP1P53384 320 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 POLR2FP61218 127 aaKnown RBP13.82□□□□□ -0.2
SF1-216ENST00000486867 RAPGEF1Q13905 1077 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 NR1I3Q14994 352 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 EML3Q32P44 896 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 ITPRIPL2Q3MIP1 535 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 MSANTD2Q6P1R3 559 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 LRSAM1Q6UWE0 723 aa13.82□□□□□ -0.2
SF1-216ENST00000486867 TADA2BQ86TJ2 420 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms