RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 CBWD2Q8IUF1 395 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 BBS7Q8IWZ6 715 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 PGBD3Q8N328 593 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 RASSF8Q8NHQ8 419 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 TMX3Q96JJ7 454 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 SLITRK1Q96PX8 696 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 ELOVL4Q9GZR5 314 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 DPEP3Q9H4B8 488 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 CD93Q9NPY3 652 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 TBC1D3BA6NDS4 549 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 H3BQV1 296 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 FTH1P19P0C7X4 201 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 RDXP35241 583 aaKnown RBP20.48■□□□□ 0.87
CHRD-216ENST00000486066 HOXD13P35453 343 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 TUBP50607 506 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 DUOXA2Q1HG44 320 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 EGFLAMQ63HQ2 1017 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 TMEM25Q86YD3 366 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 WDR49Q8IV35 697 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 NAT16Q8N8M0 369 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 HSPA12BQ96MM6 686 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 ACOX2Q99424 681 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 B3GNT5Q9BYG0 378 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 SPHK2Q9NRA0 654 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 DEC1Q9P2X7 70 aa20.48■□□□□ 0.87
CHRD-216ENST00000486066 FBXO2Q9UK22 296 aaPredicted RBP20.48■□□□□ 0.87
CHRD-216ENST00000486066 KNL1Q8NG31 2342 aa20.47■□□□□ 0.87
CHRD-216ENST00000486066 CFAP46Q8IYW2 2715 aa20.47■□□□□ 0.87
CHRD-216ENST00000486066 ZNF217O75362 1048 aa20.47■□□□□ 0.87
CHRD-216ENST00000486066 DKK1O94907 266 aa20.47■□□□□ 0.87
CHRD-216ENST00000486066 CD2BP2O95400 341 aaKnown RBP20.47■□□□□ 0.87
CHRD-216ENST00000486066 CST3P01034 146 aaPredicted RBP20.47■□□□□ 0.87
CHRD-216ENST00000486066 SYPP08247 313 aa20.47■□□□□ 0.87
CHRD-216ENST00000486066 PTPN1P18031 435 aaKnown RBP20.47■□□□□ 0.87
CHRD-216ENST00000486066 GNL1P36915 607 aaPredicted RBP20.47■□□□□ 0.87
CHRD-216ENST00000486066 C10orf76Q5T2E6 689 aa20.47■□□□□ 0.87
CHRD-216ENST00000486066 TRAPPC11Q7Z392 1133 aa20.47■□□□□ 0.87
CHRD-216ENST00000486066 BRAPQ7Z569 592 aa20.47■□□□□ 0.87
CHRD-216ENST00000486066 NUP93Q8N1F7 819 aa20.47■□□□□ 0.87
CHRD-216ENST00000486066 TRIML1Q8N9V2 468 aa20.47■□□□□ 0.87
CHRD-216ENST00000486066 PDZD8Q8NEN9 1154 aa20.47■□□□□ 0.87
CHRD-216ENST00000486066 IPO4Q8TEX9 1081 aaKnown RBP20.47■□□□□ 0.87
CHRD-216ENST00000486066 GZF1Q9H116 711 aaPredicted RBP20.47■□□□□ 0.87
CHRD-216ENST00000486066 URB1O60287 2271 aaKnown RBP20.46■□□□□ 0.87
CHRD-216ENST00000486066 PRPF6O94906 941 aaKnown RBP20.46■□□□□ 0.87
CHRD-216ENST00000486066 STAU1O95793 577 aaKnown RBP20.46■□□□□ 0.87
CHRD-216ENST00000486066 ABL1P00519 1130 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 TNNC2P02585 160 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 YWHAQP27348 245 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 SURF1Q15526 300 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 COL28A1Q2UY09 1125 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 C19orf48Q6RUI8 117 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 PAQR9Q6ZVX9 377 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 NAXDQ8IW45 347 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 GLIS3Q8NEA6 775 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 BAHD1Q8TBE0 780 aaPredicted RBP20.46■□□□□ 0.87
CHRD-216ENST00000486066 BBC3Q96PG8 261 aaPredicted RBP20.46■□□□□ 0.87
CHRD-216ENST00000486066 CCSER2Q9H7U1 834 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 MARK1Q9P0L2 795 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 CYP8B1Q9UNU6 501 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 CABIN1Q9Y6J0 2220 aa20.46■□□□□ 0.87
CHRD-216ENST00000486066 A0A087X0B3 334 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 ZNF233A6NK53 670 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 PRRT4C9JH25 899 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 CLDN5O00501 218 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 CACNG3O60359 315 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 RTN3O95197 1032 aaPredicted RBP20.45■□□□□ 0.86
CHRD-216ENST00000486066 PGFP49763 221 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 PREPLQ4J6C6 727 aaPredicted RBP20.45■□□□□ 0.86
CHRD-216ENST00000486066 HECTD3Q5T447 861 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 SV2BQ7L1I2 683 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 SLCO6A1Q86UG4 719 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 SYCP3Q8IZU3 236 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 B3GALNT2Q8NCR0 500 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 SCAMP5Q8TAC9 235 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 DNASE2BQ8WZ79 361 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 MRGPRX1Q96LB2 322 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 KCNK16Q96T55 309 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 MMS19Q96T76 1030 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 XYLT2Q9H1B5 865 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 FAM124BQ9H5Z6 455 aaPredicted RBP20.45■□□□□ 0.86
CHRD-216ENST00000486066 DKK4Q9UBT3 224 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 NFE2L3Q9Y4A8 694 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 ASXL3Q9C0F0 2248 aa20.45■□□□□ 0.86
CHRD-216ENST00000486066 CKAP5Q14008 2032 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 WASP42768 502 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 GRIK2Q13002 908 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 BTBD8Q5XKL5 378 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 HTR3DQ70Z44 454 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 HS2ST1Q7LGA3 356 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 PNPLA1Q8N8W4 532 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 FBXO32Q969P5 355 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 P2RY11Q96G91 374 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 TRIM9Q9C026 710 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 TOR4AQ9NXH8 423 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 HSPBP1Q9NZL4 362 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 KIAA1522Q9P206 1035 aaPredicted RBP20.44■□□□□ 0.86
CHRD-216ENST00000486066 CHORDC1Q9UHD1 332 aaPredicted RBP20.44■□□□□ 0.86
CHRD-216ENST00000486066 PCOLCE2Q9UKZ9 415 aa20.44■□□□□ 0.86
CHRD-216ENST00000486066 SRPRBQ9Y5M8 271 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms