RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 SCAPQ12770 1279 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 TUSC3Q13454 348 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 UAP1L1Q3KQV9 507 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 LRCH2Q5VUJ6 765 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 ANO5Q75V66 913 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 PDZD4Q76G19 769 aaPredicted RBP7.27□□□□□ -1.25
SMC4-217ENST00000485867 MIER3Q7Z3K6 550 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 HACE1Q8IYU2 909 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 TMTC2Q8N394 836 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 FANCBQ8NB91 859 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 RDM1Q8NG50 284 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 EXOC6Q8TAG9 804 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 ZSCAN18Q8TBC5 510 aaPredicted RBP7.27□□□□□ -1.25
SMC4-217ENST00000485867 RNF141Q8WVD5 230 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 PRPF31Q8WWY3 499 aaKnown RBP7.27□□□□□ -1.25
SMC4-217ENST00000485867 PSPC1Q8WXF1 523 aaKnown RBP7.27□□□□□ -1.25
SMC4-217ENST00000485867 SLC5A5Q92911 643 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 GJA10Q969M2 543 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 TMEM143Q96AN5 459 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 RHOVQ96L33 236 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 RIT2Q99578 217 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 TEKT3Q9BXF9 490 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 CDY1Q9Y6F8 540 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 PTPRQQ9UMZ3 2332 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 COL6A6A6NMZ7 2263 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 PATE3B3GLJ2 98 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 DCLK1O15075 740 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 EDIL3O43854 480 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 RHOBTB1O94844 696 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 BPNT1O95861 308 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 ZGLP1P0C6A0 271 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 GJA1P17302 382 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 ARF4P18085 180 aaPredicted RBP7.26□□□□□ -1.25
SMC4-217ENST00000485867 TRHRP34981 398 aaPredicted RBP7.26□□□□□ -1.25
SMC4-217ENST00000485867 NPEPPSP55786 919 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 SIM1P81133 766 aaPredicted RBP7.26□□□□□ -1.25
SMC4-217ENST00000485867 ROR1Q01973 937 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 EGR3Q06889 387 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 FCHO2Q0JRZ9 810 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 PCBP1Q15365 356 aaKnown RBP eCLIP7.26□□□□□ -1.256e-13■■□□□ 12.1
SMC4-217ENST00000485867 DIEXFQ68CQ4 756 aaKnown RBP7.26□□□□□ -1.25
SMC4-217ENST00000485867 B3GNT9Q6UX72 402 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 YAF2Q8IY57 180 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 RNF149Q8NC42 400 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 E2F7Q96AV8 911 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 CRELD1Q96HD1 420 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 TRIM6Q9C030 488 aaPredicted RBP7.26□□□□□ -1.25
SMC4-217ENST00000485867 SLC32A1Q9H598 525 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 DHX33Q9H6R0 707 aaKnown RBP7.26□□□□□ -1.25
SMC4-217ENST00000485867 POLR3BQ9NW08 1133 aaPredicted RBP7.26□□□□□ -1.25
SMC4-217ENST00000485867 SNTG2Q9NY99 539 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 GTSE1Q9NYZ3 720 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 SLC8A2Q9UPR5 921 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 BACE2Q9Y5Z0 518 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 SLC12A7Q9Y666 1083 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 CEP192Q8TEP8 1941 aa7.26□□□□□ -1.25
SMC4-217ENST00000485867 TENM4Q6N022 2769 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 PTPN13Q12923 2485 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 DENND4CQ5VZ89 1909 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 PLXND1Q9Y4D7 1925 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 ESYT2A0FGR8 921 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 H0Y626 953 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 PRRG1O14668 218 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 PTGESO14684 152 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 PSMD10O75832 226 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 C1QL1O75973 258 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 TRIM16O95361 564 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 SEC24AO95486 1093 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 NPTXRO95502 500 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 PRB1P04280 392 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 MED14OSP0DP75 135 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 IGFBP6P24592 240 aaPredicted RBP7.25□□□□□ -1.25
SMC4-217ENST00000485867 MCM5P33992 734 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 EPHA5P54756 1037 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 PTENP60484 403 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 IRX4P78413 519 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 HDAC1Q13547 482 aaPredicted RBP7.25□□□□□ -1.25
SMC4-217ENST00000485867 KARSQ15046 597 aaKnown RBP7.25□□□□□ -1.25
SMC4-217ENST00000485867 NAB2Q15742 525 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 CYP4A22Q5TCH4 519 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 PIP4P1Q86T03 277 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 FERMT3Q86UX7 667 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 CDR2LQ86X02 465 aaPredicted RBP7.25□□□□□ -1.25
SMC4-217ENST00000485867 TCEAL8Q8IYN2 117 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 REXO1Q8N1G1 1221 aaKnown RBP7.25□□□□□ -1.25
SMC4-217ENST00000485867 CHCHD4Q8N4Q1 142 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 CAMKK1Q8N5S9 505 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 PDZD8Q8NEN9 1154 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 TTC8Q8TAM2 541 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 HNRNPLLQ8WVV9 542 aaKnown RBP7.25□□□□□ -1.25
SMC4-217ENST00000485867 LRIG1Q96JA1 1093 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 ZFYVE19Q96K21 471 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 RNF32Q9H0A6 362 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 REV1Q9UBZ9 1251 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 POLR3KQ9Y2Y1 108 aaPredicted RBP7.25□□□□□ -1.25
SMC4-217ENST00000485867 INSL5Q9Y5Q6 135 aa7.25□□□□□ -1.25
SMC4-217ENST00000485867 CFAP46Q8IYW2 2715 aa7.24□□□□□ -1.25
SMC4-217ENST00000485867 CITO14578 2027 aa7.24□□□□□ -1.25
SMC4-217ENST00000485867 CCDC194A0A1B0GVG4 234 aa7.24□□□□□ -1.25
SMC4-217ENST00000485867 KRTAP9-7A8MTY7 169 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms