RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 CORO1BQ9BR76 489 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 SLC46A2Q9BY10 475 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 UBXN6Q9BZV1 441 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 KCNH6Q9H252 994 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 MMRN2Q9H8L6 949 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 PIDD1Q9HB75 910 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 PNPLA8Q9NP80 782 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 COMMD8Q9NX08 183 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 OSER1Q9NX31 292 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 RAB20Q9NX57 234 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 DLGAP2Q9P1A6 1054 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 TJP2Q9UDY2 1190 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 ARMCX3Q9UH62 379 aaPredicted RBP6.08□□□□□ -1.44
CUX1-208ENST00000485792 MRPS23Q9Y3D9 190 aaKnown RBP6.08□□□□□ -1.44
CUX1-208ENST00000485792 MTF2Q9Y483 593 aaPredicted RBP6.08□□□□□ -1.44
CUX1-208ENST00000485792 ABCA7Q8IZY2 2146 aa6.08□□□□□ -1.44
CUX1-208ENST00000485792 TP53BP1Q12888 1972 aaPredicted RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 THADAQ6YHU6 1953 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 GON4LQ3T8J9 2241 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 EP300Q09472 2414 aaPredicted RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 GVINP1Q7Z2Y8 2422 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 CACNA1EQ15878 2313 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 A0A1W2PRU2 124 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 GTPBP10A4D1E9 387 aaKnown RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 C2orf78A6NCI8 922 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 LRRC10BA6NIK2 292 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 BECN2A8MW95 431 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 SCAMP3O14828 347 aaKnown RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 STX10O60499 249 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 GNA14O95837 355 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 PDGFRBP09619 1106 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 CSH1P0DML2 217 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 CSH2P0DML3 217 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 EPB41P11171 864 aaKnown RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 KRT13P13646 458 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 RFX1P22670 979 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 BDNFP23560 247 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 DDX6P26196 483 aaKnown RBP eCLIP6.07□□□□□ -1.44
CUX1-208ENST00000485792 CDC25CP30307 473 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 GBP2P32456 591 aaPredicted RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 SOX9P48436 509 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 RPL34P49207 117 aaKnown RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 KLK7P49862 253 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 MXI1P50539 228 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 CLCN5P51795 746 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 ZNF132P52740 706 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 NDST1P52848 882 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 RAD23BP54727 409 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 RPL10AP62906 217 aaKnown RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 GPC5P78333 572 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 GCNT1Q02742 428 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 TCF15Q12870 199 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 PAK1Q13153 545 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 BIRC3Q13489 604 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 TRPC3Q13507 836 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 STIM1Q13586 685 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 GRM2Q14416 872 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 HSP90AA4PQ58FG1 418 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 MDH1BQ5I0G3 518 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 RAB41Q5JT25 222 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 ARTNQ5T4W7 220 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 CYP4A22Q5TCH4 519 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 IQCEQ6IPM2 695 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 KLHL10Q6JEL2 608 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 PHLDB3Q6NSJ2 640 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 PKN3Q6P5Z2 889 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 TXNDC11Q6PKC3 985 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 PDZD4Q76G19 769 aaPredicted RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 CYP2U1Q7Z449 544 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 MON1AQ86VX9 555 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 TTC30AQ86WT1 665 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 MAML2Q8IZL2 1156 aaPredicted RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 TTC39CQ8N584 583 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 SLC4A11Q8NBS3 891 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 TFAP2BQ92481 460 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 DNASE1L2Q92874 299 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 JAKMIP2Q96AA8 810 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 PBXIP1Q96AQ6 731 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 E2F7Q96AV8 911 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 PIWIL1Q96J94 861 aaKnown RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 ZFYVE19Q96K21 471 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 TNIP3Q96KP6 325 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 KCNK16Q96T55 309 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 TSG101Q99816 390 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 OSBPL6Q9BZF3 934 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 NIF3L1Q9GZT8 377 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 TASP1Q9H6P5 420 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 ASAH2Q9NR71 780 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 FAM49BQ9NUQ9 324 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 POLR3BQ9NW08 1133 aaPredicted RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 ABI2Q9NYB9 513 aaPredicted RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 MAGEC2Q9UBF1 373 aaPredicted RBP6.07□□□□□ -1.44
CUX1-208ENST00000485792 CYTH4Q9UIA0 394 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 USP3Q9Y6I4 520 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 SDK1Q7Z5N4 2213 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 GPR179Q6PRD1 2367 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 SPEGQ15772 3267 aa6.07□□□□□ -1.44
CUX1-208ENST00000485792 SHROOM3Q8TF72 1996 aa6.06□□□□□ -1.44
CUX1-208ENST00000485792 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.06□□□□□ -1.44
CUX1-208ENST00000485792 ZNF840PA6NDX5 716 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms